Evidence map›Paper›PMID 38479598›Full record

ArticleThe Journal of biological chemistry2024

Refining the identity of mesenchymal cell types associated with murine periosteal and endosteal bone.

Intawat Nookaew, Jinhu Xiong, Melda Onal, Cecile Bustamante-Gomez, Visanu Wanchai, Qiang Fu, Ha-Neui Kim, Maria Almeida, Charles A O'Brien

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
10.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 24 citations in OpenAlex.

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  9. Phenylethanoid Glycosides fromInternational journal of molecular sciences · 2026
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  17. An adipo-osteoprogenitor population in the endosteal niche contributes to bone and fat formation in adult mouse bone marrow.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Intawat NookaewCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Department of Biomedical Informatics, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA. Electronic address: inookaew@uams.edu.
Jinhu XiongCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Department of Orthopaedic Surgery, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Melda OnalCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Department of Physiology and Cell Biology, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Cecile Bustamante-GomezCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Division of Endocrinology, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Visanu WanchaiDepartment of Biomedical Informatics, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Qiang FuCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Division of Endocrinology, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Ha-Neui KimCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Division of Endocrinology, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Maria AlmeidaCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Department of Orthopaedic Surgery, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Division of Endocrinology, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Charles A O'BrienCenter for Musculoskeletal Disease Research, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Department of Orthopaedic Surgery, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Division of Endocrinology, The University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA; Central Arkansas Veterans Healthcare System, Little Rock, Arkansas, USA. Electronic address: caobrien@uams.edu.
University of Arkansas for Medical Sciences · USCentral Arkansas Veterans Healthcare System · US

Funding

Understanding the Negative Prognostic Impact of Intraosseous Focal Lesions in Multiple MyelomaP20GM125503 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI Jinhu Xiong · 2018 to 2026
$23.0M
Research Supplement to Promote Diversity in Health-related ResearchR01AR049794 · NIAMS · UNIV OF ARKANSAS FOR MED SCIS · PI CHARLES A O'BRIEN · 2003 to 2026
$6.3M
The role of Piezo1 in bone homeostasis and mechanotransductionR01AR076979 · NIAMS · UNIV OF ARKANSAS FOR MED SCIS · PI Jinhu Xiong · 2020 to 2026
$2.1M
Different consequences of cellular aging in cortical versus cancellous bone- ResubmissionR01AG068449 · NIA · UNIV OF ARKANSAS FOR MED SCIS · PI ALMEIDA, MARIA JOSE, O'BRIEN, CHARLES A · 2021 to 2025
$1.9M
RANKL and lymphocyte-mediated bone lossI01BX000294 · VA · CENTRAL ARKANSAS VETERANS HLTHCARE SYS · PI O'BRIEN, CHARLES A · 2009 to 2022
–
BLRD VA I01 BX000294NIAMS NIH HHS R01 AR049794NIAMS NIH HHS R01 AR076979NIA NIH HHS R01 AG068449NIGMS NIH HHS P20 GM125503
6 · The paper itself

Abstract

Single-cell RNA-seq has led to novel designations for mesenchymal cells associated with bone as well as multiple designations for what appear to be the same cell type. The main goals of this study were to increase the amount of single-cell RNA sequence data for osteoblasts and osteocytes, to compare cells from the periosteum to those inside bone, and to clarify the major categories of cell types associated with murine bone. We created an atlas of murine bone-associated cells by harmonizing published datasets with in-house data from cells targeted by Osx1-Cre and Dmp1-Cre driver strains. Cells from periosteal bone were analyzed separately from those isolated from the endosteum and trabecular bone. Over 100,000 mesenchymal cells were mapped to reveal 11 major clusters designated fibro-1, fibro-2, chondrocytes, articular chondrocytes, tenocytes, adipo-Cxcl12 abundant reticular (CAR), osteo-CAR, preosteoblasts, osteoblasts, osteocytes, and osteo-X, the latter defined in part by periostin expression. Osteo-X, osteo-CAR, and preosteoblasts were closely associated with osteoblasts at the trabecular bone surface. Wnt16 was expressed in multiple cell types from the periosteum but not in cells from endocortical or cancellous bone. Fibro-2 cells, which express markers of stem cells, localized to the periosteum but not trabecular bone in adult mice. Suppressing bone remodeling eliminated osteoblasts and altered gene expression in preosteoblasts but did not change the abundance or location of osteo-X or osteo-CAR cells. These results provide a framework for identifying bone cell types in murine single-cell RNA-seq datasets and suggest that osteoblast progenitors reside near the surface of remodeling bone.

Indexed as

Mesenchymal Stem CellsOsteoblastsOsteocytesPeriosteumAnimalsChondrocytesMiceMice, Inbred C57BLSingle-Cell Analysisendosteumlocalizationmesenchymalosteoblastperiosteumprogenitorremodelingsingle cell

Identifiers

PMID38479598
PMCPMC11007436
OpenAlexW4392637105

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.