Evidence map›Paper›PMID 38479393›Full record

ArticleCell host & microbe2024

Stratification of Fusobacterium nucleatum by local health status in the oral cavity defines its subspecies disease association.

Madeline Krieger, Yasser M AbdelRahman, Dongseok Choi, Elizabeth A Palmer, Anna Yoo, Sean McGuire, Jens Kreth, Justin Merritt

Open access · greenAbstract read
In one paragraph

Article in Cell host & microbe, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. AI-2 production inJournal of bacteriology · 2026
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  5. 2'-Fucosyllactose AttenuatesMicroorganisms · 2026
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  6. International journal of systematic and evolutionary microbiology · 2026
    Article
  7. Pathogenic Roles ofPathogens (Basel, Switzerland) · 2026
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Addressing controversy inGut microbes · 2025
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Madeline KriegerDivision of Biomaterial and Biomedical Sciences, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA; Cancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health & Science University (OHSU), Portland, OR, USA.
Yasser M AbdelRahmanDivision of Biomaterial and Biomedical Sciences, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA; Microbiology and Immunology Department, Faculty of Pharmacy, Cairo University, Giza, Egypt; Predicine, Hayward, CA, USA.
Dongseok ChoiDepartment of Community Dentistry, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA; School of Public Health, Oregon Health & Science University (OHSU), Portland, OR, USA.
Elizabeth A PalmerDivision of Pediatric Dentistry, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA.
Anna YooDivision of Pediatric Dentistry, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA.
Sean McGuireDivision of Pediatric Dentistry, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA.
Jens KrethDivision of Biomaterial and Biomedical Sciences, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA; Department of Molecular Microbiology and Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.
Justin MerrittDivision of Biomaterial and Biomedical Sciences, School of Dentistry, Oregon Health & Science University (OHSU), Portland, OR, USA; Department of Molecular Microbiology and Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA. Electronic address: merrittj@ohsu.edu.
Oregon Health & Science University · USCairo University · EG

Funding

Advancing studies of polymicrobial diseases via streptococcal geneticsR35DE028252 · NIDCR · OREGON HEALTH & SCIENCE UNIVERSITY · PI MERRITT, JUSTIN · 2018 to 2025
$7.8M
Pyruvate oxidase: a molecular determinant of commensalism among the oral microbiomeR01DE029492 · NIDCR · OREGON HEALTH & SCIENCE UNIVERSITY · PI KRETH, JENS · 2020 to 2024
$2.5M
PORT (Portland Oral health Research Training)T90DE030859 · NIDCR · OREGON HEALTH & SCIENCE UNIVERSITY · PI WU, HUI · 2021 to 2025
$2.1M
Streptococcal secretion of pyruvate - a novel antioxidant strategy in the oral biofilmR21DE029612 · NIDCR · OREGON HEALTH & SCIENCE UNIVERSITY · PI KRETH, JENS · 2020 to 2021
$424k
NIDCR NIH HHS R01 DE029492NIDCR NIH HHS R21 DE029612NIDCR NIH HHS R35 DE028252NIDCR NIH HHS T90 DE030859
6 · The paper itself

Abstract

The ubiquitous inflammophilic oral pathobiont Fusobacterium nucleatum (Fn) is widely recognized for its strong association with inflammatory dysbiotic diseases and cancer. Fn is subdivided into four subspecies, which are historically considered functionally interchangeable in the oral cavity. To test this assumption, we analyzed patient-matched dental plaque and odontogenic abscess clinical specimens and examined whether an inflammatory environment selects for/against particular Fn subspecies. Dental plaque harbored a greater diversity of fusobacteria, with Fn. polymorphum dominating, whereas odontogenic abscesses were exceptionally biased for the largely uncharacterized organism Fn. animalis. Comparative genomic analyses revealed significant genotypic distinctions among Fn subspecies that correlate with their preferred ecological niches and support a taxonomic reassignment of each as a distinct Fusobacterium species. Despite originating as a low-abundance organism in dental plaque, Fn. animalis typically outcompetes other oral fusobacteria within the inflammatory abscess environment, which may explain its prevalence in other oral and extraoral diseases.

Indexed as

Dental PlaqueFusobacteriumFusobacterium nucleatumAbscessHumansMouthFusobacterium nucleatumFusobacterium nucleatum subspeciesoral abscessoral diseaseoral microbiome

Identifiers

PMID38479393
PMCPMC11018276
OpenAlexW4392699848

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.