Evidence map›Paper›PMID 38476948›Full record

ArticleFrontiers in microbiology2024

High prevalence of pre-treatment and acquired HIV-1 drug resistance mutations among non-citizens living with HIV in Botswana.

Patrick T Mokgethi, Wonderful T Choga, Dorcas Maruapula, Natasha O Moraka, Kaelo K Seatla, Ontlametse T Bareng, Doreen D Ditshwanelo, Graceful Mulenga, Terence Mohammed, Pearl M Kaumba and 7 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 4 countries.

Patrick T MokgethiBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Wonderful T ChogaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Dorcas MaruapulaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Natasha O MorakaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Kaelo K SeatlaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Ontlametse T BarengBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Doreen D DitshwaneloBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Graceful MulengaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Terence MohammedBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Pearl M KaumbaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Moses ChihungwaIndependence Avenue Clinic, Gaborone, Botswana.
Tafireyi MarukutiraBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Sikhulile MoyoBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Catherine K KoofhethileBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Diana DickinsonIndependence Avenue Clinic, Gaborone, Botswana.
Sununguko W MpolokaDepartment of Biological Sciences, University of Botswana, Gaborone, Botswana.
Simani GaseitsiweBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Botswana Harvard AIDS Institute Partnership · BWUniversity of Botswana · BWHarvard University · USStellenbosch University · ZA

Funding

Viral Diversity an Innovative Biomarker for Refining Estimates of HIV IncidenceK43TW012350 · FIC · THE BOTSWANA HARVARD HEALTH PARTNERSHIP · PI Sikhulile Moyo · 2022 to 2026
$682k
FIC NIH HHS K43 TW012350
6 · The paper itself

Abstract

Background: Approximately 30,000 non-citizens are living with HIV in Botswana, all of whom as of 2020 are eligible to receive free antiretroviral treatment (ART) within the country. We assessed the prevalence of HIV-1 mutational profiles [pre-treatment drug resistance (PDR) and acquired drug resistance (ADR)] among treatment-experienced (TE) and treatment-naïve (TN) non-citizens living with HIV in Botswana. Methods: A total of 152 non-citizens living with HIV were enrolled from a migrant HIV clinic at Independence Surgery, a private practice in Botswana from 2019-2021. Viral RNA isolated from plasma samples were genotyped for HIV drug resistance (HIVDR) using Sanger sequencing. Major known HIV drug resistance mutations (DRMs) in the Results: A total of 60/152 (39.5%) participants had a detectable viral load (VL) >40 copies/mL and these were included in the subsequent analyses. The median age at enrollment was 43 years (Q1, Q3: 38-48). Among individuals with VL > 40 copies/mL, 60% (36/60) were treatment-experienced with 53% (19/36) of them on Atripla. Genotyping had a 62% (37/60) success rate - 24 were TE, and 13 were TN. A total of 29 participants (78.4, 95% CI: 0.12-0.35) had major HIV DRMs, including at least one non-nucleoside reverse transcriptase inhibitor (NNRTI) associated DRM. In TE individuals, ADR to any antiretroviral drug was 83.3% (20/24), while for PDR was 69.2% (9/13). The most frequent DRMs were nucleoside reverse transcriptase inhibitors (NRTIs) M184V (62.1%, 18/29), NNRTIs V106M (41.4%, 12/29), and K103N (34.4%, 10/29). No integrase strand transfer inhibitor-associated DRMs were reported. Conclusion: We report high rates of PDR and ADR in ART-experienced and ART-naïve non-citizens, respectively, in Botswana. Given the uncertainty of time of HIV acquisition and treatment adherence levels in this population, routine HIV-1C VL monitoring coupled with HIVDR genotyping is crucial for long-term ART success.

Indexed as

acquired HIV drug resistance (ADR)antiretroviral therapy (ART)Botswanadrug resistance mutations (DRMs)HIV-1Cnon-citizenspre-treament drug resistance (PDR)

Identifiers

PMID38476948
PMCPMC10929613
OpenAlexW4391967721

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.