Evidence map›Paper›PMID 38476100›Full record

ArticleMolecular plant pathology2024

A type VI secretion system effector TseG of Pantoea ananatis is involved in virulence and antibacterial activity.

Xiaozhen Zhao, Lu Gao, Qurban Ali, Chenjie Yu, Bingqin Yuan, Hai Huang, Juying Long, Qin Gu, Huijun Wu, Xuewen Gao

Abstract read
In one paragraph

Article in Molecular plant pathology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Comparative genomics ofMicrobial genomics · 2026
    Article
  3. Article
  4. Dissecting the antibacterial functions of the T6SS-2 cluster inApplied and environmental microbiology · 2025
    Article
  5. Article
  6. Comparative genomics-based insights intoApplied and environmental microbiology · 2025
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xiaozhen ZhaoKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Lu GaoKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Qurban AliKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Chenjie YuKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Bingqin YuanKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Hai HuangKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Juying LongKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.
Qin GuKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.ORCID 0000-0002-3722-6375
Huijun WuKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.ORCID 0000-0001-5586-1607
Xuewen GaoKey Laboratory of Monitoring and Management of Crop Disease and Pest Insects, College of Plant Protection, Nanjing Agricultural University, Ministry of Education, Nanjing, China.ORCID 0000-0002-5328-9325

Funding

National Key R&D Plan Intergovernmental International Science and Technology Innovation Cooperation Project 2022YFE0121800;National Key R&D Program of China 2023YFD1401400;Qingdao Special demonstration project for science and technology benefiting the people 23-3-8-xdny-2-nsh;Special Fund for the Mount Taishan Industrial Leading Talent Project tscx202306114
6 · The paper itself

Abstract

The type VI secretion system (T6SS) of many gram-negative bacteria injects toxic effectors into adjacent cells to manipulate host cells during pathogenesis or to kill competing bacteria. However, the identification and function of the T6SS effectors remains only partly known. Pantoea ananatis, a gram-negative bacterium, is commonly found in various plants and natural environments, including water and soil. In the current study, genomic analysis of P. ananatis DZ-12 causing brown stalk rot on maize demonstrated that it carries three T6SS gene clusters, namely, T6SS-1, T6SS-2, and T6SS-3. Interestingly, only T6SS-1 secretion systems are involved in pathogenicity and bacterial competition. The study also investigated the T6SS-1 system in detail and identified an unknown T6SS-1-secreted effector TseG by using the upstream T6SS effector chaperone TecG containing a conserved domain of DUF2169. TseG can directly interact with the chaperone TecG for delivery and with a downstream immunity protein TsiG for protection from its toxicity. TseG, highly conserved in the Pantoea genus, is involved in virulence in maize, potato, and onion. Additionally, P. ananatis uses TseG to target Escherichia coli, gaining a competitive advantage. This study provides the first report on the T6SS-1-secreted effector from P. ananatis, thereby enriching our understanding of the various types and functions of type VI effector proteins.

Indexed as

PantoeaType VI Secretion SystemsAnti-Bacterial AgentsBacterial ProteinsBacterial Secretion SystemsMolecular ChaperonesVirulenceAnti-Bacterial AgentsBacterial ProteinsBacterial Secretion SystemsMolecular ChaperonesType VI Secretion Systemsantibacterial activitychaperoneeffectorimmunity proteinPantoea ananatispathogenicityT6SS

Identifiers

PMID38476100
PMCPMC10933656

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.