Evidence map›Paper›PMID 38473160›Full record

ArticleAnimals : an open access journal from MDPI2024

Selection Signal Analysis Reveals Hainan Yellow Cattle Are Being Selectively Bred for Heat Tolerance.

Liuhao Wang, Xuehao Yan, Hongfen Wu, Feifan Wang, Ziqi Zhong, Gang Zheng, Qian Xiao, Kebang Wu, Wei Na

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Liuhao WangSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
Xuehao YanSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
Hongfen WuSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
Feifan WangSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.ORCID 0009-0003-9599-5687
Ziqi ZhongSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.ORCID 0000-0002-9655-3595
Gang ZhengSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
Qian XiaoSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.ORCID 0000-0002-1293-0569
Kebang WuSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
Wei NaSchool of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
Hainan University · CN

Funding

Hainan Province Science and Technology Special Fund ZDYF2021XDNY173
6 · The paper itself

Abstract

Hainan yellow cattle are indigenous Zebu cattle from southern China known for their tolerance of heat and strong resistance to disease. Generations of adaptation to the tropical environment of southern China and decades of artificial breeding have left identifiable selection signals in their genomic makeup. However, information on the selection signatures of Hainan yellow cattle is scarce. Herein, we compared the genomes of Hainan yellow cattle with those of Zebu, Qinchuan, Nanyang, and Yanbian cattle breeds by the composite likelihood ratio method (CLR), Tajima's D method, and identifying runs of homozygosity (ROHs), each of which may provide evidence of the genes responsible for heat tolerance in Hainan yellow cattle. The results showed that 5210, 1972, and 1290 single nucleotide polymorphisms (SNPs) were screened by the CLR method, Tajima's D method, and ROH method, respectively. A total of 453, 450, and 325 genes, respectively, were identified near these SNPs. These genes were significantly enriched in 65 Gene Ontology (GO) functional terms and 11 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways (corrected

Indexed as

Hainan yellow cattleheat toleranceselection signature

Identifiers

PMID38473160
PMCPMC10931139
OpenAlexW4392387027

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.