Evidence map›Paper›PMID 38468092›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Genome-Wide Screen for Enhanced Noncanonical Amino Acid Incorporation in Yeast.

Briana R Lino, James A Van Deventer

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Briana R LinoChemical and Biological Engineering Department, Tufts University, Medford, MA, USA.
James A Van DeventerChemical and Biological Engineering Department, Tufts University, Medford, MA, USA. James.Van_Deventer@Tufts.edu.

Funding

The yeast surface as a platform for inhibitor discoveryR35GM133471 · NIGMS · TUFTS UNIVERSITY MEDFORD · PI James Allen Van Deventer · 2019 to 2026
$3.1M
NIGMS NIH HHS R35 GM133471
6 · The paper itself

Abstract

Expanding the genetic code beyond the 20 canonical amino acids enables access to a wide range of chemical functionality that is inaccessible within conventionally biosynthesized proteins. The vast majority of efforts to expand the genetic code have focused on the orthogonal translation systems required to achieve the genetically encoded addition of noncanonical amino acids (ncAAs) into proteins. There remain tremendous opportunities for identifying genetic and genomic factors that enhance ncAA incorporation. Here we describe genome-wide screening strategies to identify factors that enable more efficient addition of ncAAs to biosynthesized proteins. These unbiased screens can reveal previously unknown genes or mutations that can enhance ncAA incorporation and deepen our understanding of the translation apparatus.

Indexed as

Amino AcidsAmino Acyl-tRNA SynthetasesGenetic CodeProteinsSaccharomyces cerevisiaeAmino AcidsAmino Acyl-tRNA SynthetasesProteinsGenetic code expansionGenome-wide screenHigh-throughput screeningNoncanonical amino acidsYeast

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.