Evidence map›Paper›PMID 38467832›Full record

ArticleThe EMBO journal2024

P. aeruginosa CtpA protease adopts a novel activation mechanism to initiate the proteolytic process.

Hao-Chi Hsu, Michelle Wang, Amanda Kovach, Andrew J Darwin, Huilin Li

Open access · diamondAbstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. A conserved hub protein required for peptidoglycan remodeling and cell division inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Control of theJournal of bacteriology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Hao-Chi HsuDepartment of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA.
Michelle WangDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, USA.ORCID http://orcid.org/0009-0009-2522-5613
Amanda KovachDepartment of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA.ORCID http://orcid.org/0000-0002-1527-1642
Andrew J DarwinDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, USA. andrew.darwin@med.nyu.edu.ORCID http://orcid.org/0000-0002-7751-1293
Huilin LiDepartment of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA. Huilin.Li@vai.org.ORCID http://orcid.org/0000-0001-8085-8928
Van Andel Institute · USNew York University · US

Funding

C-terminal proteolysis in the Pseudomonas aeruginosa cell envelopeR01AI136901 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DARWIN, ANDREW J. · 2018 to 2023
$3.1M
NIAID NIH HHS R01 AI136901
6 · The paper itself

Abstract

During bacterial cell growth, hydrolases cleave peptide cross-links between strands of the peptidoglycan sacculus to allow new strand insertion. The Pseudomonas aeruginosa carboxyl-terminal processing protease (CTP) CtpA regulates some of these hydrolases by degrading them. CtpA assembles as an inactive hexamer composed of a trimer-of-dimers, but its lipoprotein binding partner LbcA activates CtpA by an unknown mechanism. Here, we report the cryo-EM structures of the CtpA-LbcA complex. LbcA has an N-terminal adaptor domain that binds to CtpA, and a C-terminal superhelical tetratricopeptide repeat domain. One LbcA molecule attaches to each of the three vertices of a CtpA hexamer. LbcA triggers relocation of the CtpA PDZ domain, remodeling of the substrate binding pocket, and realignment of the catalytic residues. Surprisingly, only one CtpA molecule in a CtpA dimer is activated upon LbcA binding. Also, a long loop from one CtpA dimer inserts into a neighboring dimer to facilitate the proteolytic activity. This work has revealed an activation mechanism for a bacterial CTP that is strikingly different from other CTPs that have been characterized structurally.

Indexed as

EndopeptidasesPseudomonas aeruginosaProteolysisEndopeptidasesCell WallPeptidoglycan HydrolasesProtease ActivationProtein ComplexPseudomonas aeruginosa

Identifiers

PMID38467832
PMCPMC11021448
OpenAlexW4392641844

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.