Evidence map›Paper›PMID 38466837›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Thermodynamic modulation of gephyrin condensation by inhibitory synapse components.

Gyehyun Lee, Seungjoon Kim, Da-Eun Hwang, Yu-Gon Eom, Gyubin Jang, Hye Yoon Park, Jeong-Mo Choi, Jaewon Ko, Yongdae Shin

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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  3. Article
  4. Competition between glycine and GABAProceedings of the National Academy of Sciences of the United States of America · 2025
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  5. Article
  6. Review
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  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Gyehyun LeeDepartment of Mechanical Engineering, Seoul National University, Seoul 08826, Republic of Korea.
Seungjoon KimDepartment of Brain Sciences, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu 42988, Republic of Korea.ORCID 0000-0001-6298-5552
Da-Eun HwangDepartment of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan 46241, Republic of Korea.
Yu-Gon EomDepartment of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan 46241, Republic of Korea.
Gyubin JangDepartment of Brain Sciences, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu 42988, Republic of Korea.ORCID 0009-0001-3811-6792
Hye Yoon ParkDepartment of Physics and Astronomy, Seoul National University, Seoul 08826, Republic of Korea.ORCID 0000-0003-4704-8178
Jeong-Mo ChoiDepartment of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan 46241, Republic of Korea.
Jaewon KoDepartment of Brain Sciences, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu 42988, Republic of Korea.ORCID 0000-0001-9184-1574
Yongdae ShinDepartment of Mechanical Engineering, Seoul National University, Seoul 08826, Republic of Korea.ORCID 0000-0003-3441-1986

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phase separation drives compartmentalization of intracellular contents into various biomolecular condensates. Individual condensate components are thought to differentially contribute to the organization and function of condensates. However, how intermolecular interactions among constituent biomolecules modulate the phase behaviors of multicomponent condensates remains unclear. Here, we used core components of the inhibitory postsynaptic density (iPSD) as a model system to quantitatively probe how the network of intra- and intermolecular interactions defines the composition and cellular distribution of biomolecular condensates. We found that oligomerization-driven phase separation of gephyrin, an iPSD-specific scaffold, is critically modulated by an intrinsically disordered linker region exhibiting minimal homotypic attractions. Other iPSD components, such as neurotransmitter receptors, differentially promote gephyrin condensation through distinct binding modes and affinities. We further demonstrated that the local accumulation of scaffold-binding proteins at the cell membrane promotes the nucleation of gephyrin condensates in neurons. These results suggest that in multicomponent systems, the extent of scaffold condensation can be fine-tuned by scaffold-binding factors, a potential regulatory mechanism for self-organized compartmentalization in cells.

Indexed as

Carrier ProteinsMembrane ProteinsSynapsesThermodynamicsCarrier ProteinsgephyrinMembrane Proteinsbiomolecular condensatephase separationpolyphasic linkagesynapse

Identifiers

PMID38466837
PMCPMC10963017

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.