Evidence map›Paper›PMID 38464938›Full record

ArticleBio-protocol2024

Mobilization of Plasmids From Bacteria Into Diatoms by Conjugation Technique.

Amneh Aoudi, Ossama Labiad, Ramdane Igalouzene, Ousséma Mejri, Maxime Sanchez, Maxime Sanchez

Open access · diamondAbstract read
In one paragraph

Article in Bio-protocol, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Amneh AoudiTumor Escape Resistance and Immunity Department, Cancer Research Center of Lyon (CRCL), Lyon, France.
Ossama LabiadTumor Escape Resistance and Immunity Department, Cancer Research Center of Lyon (CRCL), Lyon, France.
Ramdane IgalouzeneTumor Escape Resistance and Immunity Department, Cancer Research Center of Lyon (CRCL), Lyon, France.
Ousséma MejriTumor Escape Resistance and Immunity Department, Cancer Research Center of Lyon (CRCL), Lyon, France.
Maxime SanchezTumor Escape Resistance and Immunity Department, Cancer Research Center of Lyon (CRCL), Lyon, France.
Maxime SanchezTumor Escape Resistance and Immunity Department, Cancer Research Center of Lyon (CRCL), Lyon, France.
Université Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diatoms serve as a source for a variety of compounds with particular biotechnological interest. Therefore, redirecting the flow to a specific pathway requires the elucidation of the gene's specific function. The most commonly used method in diatoms is biolistic transformation, which is a very expensive and time-consuming method. The use of episomes that are maintained as closed circles at a copy number equivalent to native chromosomes has become a useful genetic system for protein expression that avoids multiple insertions, position-specific effects on expression, and potential knockout of non-targeted genes. These episomes can be introduced from bacteria into diatoms via conjugation. Here, we describe a detailed protocol for gene expression that includes 1) the gateway cloning strategy and 2) the conjugation protocol for the mobilization of plasmids from bacteria to diatoms.

Indexed as

BacteriaConjugationDestination vectorDiatomMobilization plasmidPhaeodactylum tricornutum

Identifiers

PMID38464938
PMCPMC10917694
OpenAlexW4391974174

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.