Evidence map›Paper›PMID 38464305›Full record

ArticlebioRxiv : the preprint server for biology2024

Domain coupling in activation of a family C GPCR.

Naomi R Latorraca, Sam Sabaat, Chris Habrian, Julia Bleier, Cherise Stanley, Susan Marqusee, Ehud Y Isacoff

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Naomi R LatorracaDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.ORCID 0000-0002-8310-8708
Sam SabaatDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.
Chris HabrianDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.
Julia BleierDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.ORCID 0000-0001-9146-9864
Cherise StanleyDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.
Susan MarquseeDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.ORCID 0000-0001-7648-2163
Ehud Y IsacoffDepartment of Molecular and Cell Biology, University of California, Berkeley, California, 94720, USA.ORCID 0000-0003-4775-9359

Funding

Optical control of neuromodulatory GPCRsRF1MH123246 · NIMH · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD, TRAUNER, DIRK HARTWIG · 2020 to 2020
$3.3M
Breakthrough Molecular Dynamics Research via an Anton2 SupercomputerR01GM116961 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI BLOOD, PHILIP D. · 2016 to 2023
$3.0M
Sequence and Environmental Determinants of the Protein Energy LandscapeR35GM149319 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SUSAN MARQUSEE · 2023 to 2026
$1.7M
Conformational mechanisms of mGluR gating and regulationR01NS119826 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD · 2021 to 2024
$1.6M
Decoding Structural Determinants of Efficacy and Specificity in a GPCR SubfamilyK99GM148823 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LATORRACA, NAOMI · 2023 to 2024
$212k
NIGMS NIH HHS K99 GM148823NIGMS NIH HHS R01 GM116961NIGMS NIH HHS R35 GM149319NIMH NIH HHS RF1 MH123246NINDS NIH HHS R01 NS119826
6 · The paper itself

Abstract

The G protein-coupled metabotropic glutamate receptors form homodimers and heterodimers with highly diverse responses to glutamate and varying physiological function. The molecular basis for this diversity remains poorly delineated. We employ molecular dynamics, single-molecule spectroscopy, and hydrogen-deuterium exchange to dissect the pathway of activation triggered by glutamate. We find that activation entails multiple loosely coupled steps and identify a novel pre-active intermediate whose transition to the active state forms dimer interactions that set signaling efficacy. Such subunit interactions generate functional diversity that differs across homodimers and heterodimers. The agonist-bound receptor is remarkably dynamic, with low occupancy of G protein-coupling conformations, providing considerable headroom for modulation of the landscape by allosteric ligands. Sites of sequence diversity within the dimerization interface and diverse coupling between activation rearrangements may contribute to precise decoding of glutamate signals and transients over broad spatial and temporal scales.

Identifiers

PMID38464305
PMCPMC10925283

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.