Evidence map›Paper›PMID 38463997›Full record

ArticlebioRxiv : the preprint server for biology2024

Cephalopod Sex Determination and its Ancient Evolutionary Origin.

Gabrielle C Coffing, Silas Tittes, Scott T Small, Jeremea O Songco-Casey, Denise M Piscopo, Judit R Pungor, Adam C Miller, Cristopher M Niell, Andrew D Kern

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Gabrielle C CoffingDepartment of Biology, University of Oregon.ORCID 0000-0001-8546-6595
Silas TittesDepartment of Biology, University of Oregon.ORCID 0000-0003-4697-7434
Scott T SmallDepartment of Biology, University of Oregon.ORCID 0000-0002-8585-937X
Jeremea O Songco-CaseyDepartment of Biology, University of Oregon.ORCID 0000-0003-3118-6111
Denise M PiscopoDepartment of Biology, University of Oregon.
Judit R PungorDepartment of Biology, University of Oregon.ORCID 0000-0002-3858-9442
Adam C MillerDepartment of Biology, University of Oregon.ORCID 0000-0001-7519-3677
Cristopher M NiellDepartment of Biology, University of Oregon.ORCID 0000-0001-6283-3540
Andrew D KernDepartment of Biology, University of Oregon.ORCID 0000-0003-4381-4680
University of Oregon · US

Funding

Deep learning for population geneticsR01HG010774 · NHGRI · UNIVERSITY OF OREGON · PI ANDREW D KERN · 2020 to 2026
$3.2M
Neural coding and functional organization of the octopus visual systemR01NS118466 · NINDS · UNIVERSITY OF OREGON · PI NIELL, CRISTOPHER M · 2023 to 2024
$695k
NHGRI NIH HHS R01 HG010774NINDS NIH HHS R01 NS118466
6 · The paper itself

Abstract

Octopuses, squids, and cuttlefishes - the coleoid cephalopods - are a remarkable branch in the tree of life whose members exhibit a repertoire of sophisticated behaviors (Hanlon and Messenger, 2018). As a clade, coleoids harbor an incredible variety of novel traits including the most complex nervous system among invertebrates, derived camera-type eyes, and rapid adaptive camouflage abilities (Young, 1971; Hanlon, 2007). The burst of evolutionary novelty that distinguishes cephalopods is even more striking in a phylogenetic context; cephalopods are a deeply diverged lineage that last share a common ancestor with other extant molluscs in the Cambrian period, roughly 550 million years ago (Ponder and Lindberg, 2008; Huang et al., 2022). With recent advances in genome sequencing technologies, we have the capability to explore the genomic foundations of cephalopod novelties. Here, using PacBio long-read sequencing of genomic DNA and IsoSeq full-length mRNA sequencing, we provide a novel chromosome-scale reference genome and annotation for a female California two-spot octopus (

Identifiers

PMID38463997
PMCPMC10925132
OpenAlexW4392189708

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.