Evidence map›Paper›PMID 38463979›Full record

ArticlebioRxiv : the preprint server for biology2024

Transcriptomic analysis of the human habenula in schizophrenia.

Ege A Yalcinbas, Bukola Ajanaku, Erik D Nelson, Renee Garcia-Flores, Nicholas J Eagles, Kelsey D Montgomery, Joshua M Stolz, Joshua Wu, Heena R Divecha, Atharv Chandra and 12 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 2 institutions in 1 country.

Renee Garcia-FloresORCID 0000-0001-8812-120X
Nicholas J EaglesORCID 0000-0002-9808-5254
Kelsey D MontgomeryORCID 0000-0001-8420-0138
Joshua M Stolz
Joshua Wu
Atharv Chandra
Rahul A Bharadwaj
Anandita Rajpurohit
Daniel R WeinbergerORCID 0000-0003-2409-2969
Louise A Huuki-MyersORCID 0000-0001-5148-3602
Leonardo Collado-TorresORCID 0000-0003-2140-308X
Kristen R MaynardORCID 0000-0003-0031-8468
Lieber Institute for Brain Development · USJohns Hopkins University · US

Funding

INTERDISCIPLINARY TRAINING PROGRAM IN NEUROSCIENCEST32MH015330 · NIMH · JOHNS HOPKINS UNIVERSITY · PI MARGOLIS, RUSSELL L · 1985 to 2024
$6.2M
Regulation of Gene Expression in the Human Habenula in Comorbid Opioid Addiction and DepressionR01DA055823 · NIDA · LIEBER INSTITUTE, INC. · PI Kristen Rose Maynard · 2022 to 2026
$3.3M
NIDA NIH HHS R01 DA055823NIMH NIH HHS T32 MH015330
6 · The paper itself

Abstract

Pathophysiology of many neuropsychiatric disorders, including schizophrenia (SCZD), is linked to habenula (Hb) function. While pharmacotherapies and deep brain stimulation targeting the Hb are emerging as promising therapeutic treatments, little is known about the cell type-specific transcriptomic organization of the human Hb or how it is altered in SCZD. Here we define the molecular neuroanatomy of the human Hb and identify transcriptomic changes in individuals with SCZD compared to neurotypical controls. Utilizing Hb-enriched postmortem human brain tissue, we performed single nucleus RNA-sequencing (snRNA-seq; n=7 neurotypical donors) and identified 17 molecularly defined Hb cell types across 16,437 nuclei, including 3 medial and 7 lateral Hb populations, several of which were conserved between rodents and humans. Single molecule fluorescent One Sentence Summary: Transcriptomic analysis of the human habenula and identification of molecular changes associated with schizophrenia risk and illness state.

Identifiers

PMID38463979
PMCPMC10925152
OpenAlexW4392189729

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.