Evidence map›Paper›PMID 38460162›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Unveiling Alterations of Epigenetic Modifications and Chromatin Architecture Leading to Lipid Metabolic Reprogramming during the Evolutionary Trastuzumab Adaptation of HER2-Positive Breast Cancer.

Ningjun Duan, Yijia Hua, Xueqi Yan, Yaozhou He, Tianyu Zeng, Jue Gong, Ziyi Fu, Wei Li, Yongmei Yin

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Phase separation of DDHD2 remodels lipid metabolism to dictate treatment sensitivity in luminal breast cancer.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Review
  8. Article
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  16. Role, mechanisms and effects ofOncology letters · 2025
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ningjun DuanDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.ORCID 0000-0001-6316-3796
Yijia HuaDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Xueqi YanDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Yaozhou HeDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Tianyu ZengDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Jue GongDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Ziyi FuDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Wei LiDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.
Yongmei YinDepartment of oncology, First affiliation hospital of Nanjing medical university, Nanjing, 210029, China.ORCID 0000-0003-3335-369X
Nanjing Medical University · CN

Funding

National Natural Science Foundation of China 81972484National Natural Science Foundation of China 82203488
6 · The paper itself

Abstract

Secondary trastuzumab resistance represents an evolutionary adaptation of HER2-positive breast cancer during anti-HER2 treatment. Most current studies have tended to prioritize HER2 and its associated signaling pathways, often overlooking broader but seemingly less relevant cellular processes, along with their associated genetic and epigenetic mechanisms. Here, transcriptome data is not only characterized but also examined epigenomic and 3D genome architecture information in both trastuzumab-sensitive and secondary-resistant breast cancer cells. The findings reveal that the global metabolic reprogramming associated with trastuzumab resistance may stem from genome-wide alterations in both histone modifications and chromatin structure. Specifically, the transcriptional activities of key genes involved in lipid metabolism appear to be regulated by variant promoter H3K27me3 and H3K4me3 modifications, as well as promoter-enhancer interactions. These discoveries offer valuable insights into how cancer cells adapt to anti-tumor drugs and have the potential to impact future diagnostic and treatment strategies.

Indexed as

Breast NeoplasmsChromatinEpigenesis, GeneticErb-b2 Receptor Tyrosine KinasesLipid MetabolismTrastuzumabAntineoplastic Agents, ImmunologicalCell Line, TumorDrug Resistance, NeoplasmFemaleHumansMetabolic ReprogrammingAntineoplastic Agents, ImmunologicalChromatinErb-b2 Receptor Tyrosine KinasesTrastuzumab3D genome architecturebreast cancerhistone modificationmetabolic reprogrammingsecondary trastuzumab resistance

Identifiers

PMID38460162
PMCPMC11095153
OpenAlexW4392618187

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.