Evidence map›Paper›PMID 38459384›Full record

ArticleNature methods2024

An optogenetic method for the controlled release of single molecules.

Purba Kashyap, Sara Bertelli, Fakun Cao, Yulia Kostritskaia, Fenja Blank, Niranjan A Srikanth, Claire Schlack-Leigers, Roberto Saleppico, Dolf Bierhuizen, Xiaocen Lu and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Nature methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Signal control during tissue regeneration in adult animals.Nature reviews. Molecular cell biology · 2026
    Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Photocleavable Systems for Cell Biology: Conceptual Design across Molecular Modalities.Chembiochem : a European journal of chemical biology · 2025
    Review
  7. Cancer Neuroscience: Decoding Neural Circuitry in Tumor Evolution for Targeted Therapy.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Effects of binding partners on thermal reversion rates of photoswitchable molecules.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Review
  13. Application of Optogenetics in Neurodegenerative Diseases.Cellular and molecular neurobiology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Purba KashyapInstitut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany.
Sara Bertelli *Humboldt-Universität zu Berlin and Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Berlin, Germany.
Fakun Cao *Max-Planck-Institute for Infection Biology, Berlin, Germany.
Yulia Kostritskaia *Institute for Molecular Medicine, MSH Medical School Hamburg, Hamburg, Germany.ORCID http://orcid.org/0000-0001-9933-2918
Fenja Blank *Institut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany.ORCID http://orcid.org/0009-0004-4819-0963
Niranjan A SrikanthInstitut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany.ORCID http://orcid.org/0009-0005-1994-0320
Claire Schlack-LeigersInstitut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany.
Roberto SaleppicoHeidelberg University Biochemistry Center, Heidelberg, Germany.
Dolf BierhuizenInstitut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany.ORCID http://orcid.org/0000-0001-5466-437X
Xiaocen LuDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.ORCID http://orcid.org/0000-0002-8269-3837
Walter NickelHeidelberg University Biochemistry Center, Heidelberg, Germany.
Robert E CampbellDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.ORCID http://orcid.org/0000-0003-0604-092X
Andrew J R PlestedHumboldt-Universität zu Berlin and Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Berlin, Germany.ORCID http://orcid.org/0000-0001-6062-0832
Tobias StauberInstitute for Molecular Medicine, MSH Medical School Hamburg, Hamburg, Germany.ORCID http://orcid.org/0000-0003-0727-6109
Marcus J TaylorMax-Planck-Institute for Infection Biology, Berlin, Germany.ORCID http://orcid.org/0000-0002-0904-2122
Helge EwersInstitut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany. helge.ewers@fu-berlin.de.ORCID http://orcid.org/0000-0003-3948-4332
Freie Universität Berlin · DEMax Planck Institute for Infection Biology · DEHeidelberg University · DEHumboldt-Universität zu Berlin · DEMSH Medical School Hamburg – University of Applied Sciences and Medical University · DEUniversity of Alberta · CA

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 278001972Deutsche Forschungsgemeinschaft (German Research Foundation) 446182550Deutsche Forschungsgemeinschaft (German Research Foundation) 499533619Deutsche Forschungsgemeinschaft (German Research Foundation) EXC-2049-390688087Gouvernement du Canada | Canadian Institutes of Health Research (Instituts de Recherche en Santé du Canada) FS-154310Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada (Conseil de Recherches en Sciences Naturelles et en Génie du Canada) RGPIN- 2018-04364
6 · The paper itself

Abstract

We developed a system for optogenetic release of single molecules in cells. We confined soluble and transmembrane proteins to the Golgi apparatus via a photocleavable protein and released them by short pulses of light. Our method allows for a light dose-dependent delivery of functional proteins to the cytosol and plasma membrane in amounts compatible with single-molecule imaging, greatly simplifying access to single-molecule microscopy of any protein in live cells. We were able to reconstitute ion conductance by delivering BK and LRRC8/volume-regulated anion channels to the plasma membrane. Finally we were able to induce NF-kB signaling in T lymphoblasts stimulated by interleukin-1 by controlled release of a signaling protein that had been knocked out. We observed light-induced formation of functional inflammatory signaling complexes that triggered phosphorylation of the inhibitor of nuclear factor kappa-B kinase only in activated cells. We thus developed an optogenetic method for the reconstitution and investigation of cellular function at the single-molecule level.

Indexed as

OptogeneticsSignal TransductionDelayed-Action PreparationsNF-kappa BPhosphorylationDelayed-Action PreparationsNF-kappa B

Identifiers

PMID38459384
PMCPMC11009104
OpenAlexW4392597369

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.