Evidence map›Paper›PMID 38454506›Full record

ArticleArthritis research & therapy2024

B cell receptor repertoire analysis in primary Sjogren's syndrome salivary glands identifies repertoire features associated with clinical activity.

Ling Chang, Zihan Zheng, Yiwen Zhou, Kun Liu, Yinong Li, Bing Zhong, Zihua Zhao, Chengshun Chen, Can Qian, Qingshan Ni and 4 more

Open access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Ling Chang *Department of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China.
Zihan Zheng *Biomedical Analysis Center, Army Medical University, Chongqing, China.
Yiwen ZhouInstitute of Immunology PLA, Army Medical University, Army Medical University, 30 Gaotanyan Avenue, Shapingba District, Chongqing, 400000, China.
Kun LiuBiomedical Analysis Center, Army Medical University, Chongqing, China.
Yinong LiBiomedical Analysis Center, Army Medical University, Chongqing, China.
Bing ZhongDepartment of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China.
Zihua ZhaoInstitute of Immunology PLA, Army Medical University, Army Medical University, 30 Gaotanyan Avenue, Shapingba District, Chongqing, 400000, China.
Chengshun ChenDepartment of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China.
Can QianDepartment of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China.
Qingshan NiBiomedical Analysis Center, Army Medical University, Chongqing, China.
Qinghua ZouDepartment of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China. zouqinghua@163.com.
Yuzhang WuInstitute of Immunology PLA, Army Medical University, Army Medical University, 30 Gaotanyan Avenue, Shapingba District, Chongqing, 400000, China. wuyuzhang@yahoo.com.
Jingyi LiDepartment of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China. lijingyi_tmmu@foxmail.com.
Liyun ZouDepartment of Rheumatology and Immunology, First Affiliated Hospital of Army Medical University, Chongqing, China. zouliyun601@163.com.
Army Medical University · CNFirst Affiliated Hospital of Chongqing Medical University · CNChongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrimary Sjogren's syndrome (pSS) is a complex autoimmune disease featuring damage to salivary and lacrimal glands, with the possibility of manifestations across multiple organs. Antibody-producing B cells have long been appreciated to play a significant role in pSS pathogenesis, with a number of autoreactive antibody species having been identified to be elevated in pSS patients. While several studies have attempted to characterize the BCR repertoires of peripheral blood B cells in pSS patients, much remains unknown about the repertoire characteristics of gland-infiltrating B cells.

methodsThrough paired scRNAseq and scBCRseq, we profiled the BCR repertoires of both infiltrating and circulating B cells in a small cohort of patients. We further utilize receptor reconstruction analyses to further investigate repertoire characteristics in a wider cohort of pSS patients previously profiled through RNAseq.

resultsVia integrated BCR and transcriptome analysis of B cell clones, we generate a trajectory progression pattern for infiltrated memory B cells in pSS. We observe significant differences in BCR repertoires between the peripheral blood and labial gland B cells of pSS patients in terms of relative expansion, isotype usage, and BCR clustering. We further observe significant decreases in IgA2 isotype usage among pSS patient labial and parotid gland B cells these analyses relative to controls as well as a positive correlation between kappa/lambda light chain usage and clinical disease activity.

conclusionsThrough BCR repertoire analysis of pSS patient salivary glands, we identify a number of novel repertoire characteristics that may serve as useful indicators of clinical disease and disease activity. By collecting these BCR repertoires into an accessible database, we hope to also enable comparative analysis of patient repertoires in pSS and potentially other autoimmune disorders.

Indexed as

Sjogren's SyndromeB-LymphocytesHumansReceptors, Antigen, B-CellSalivary GlandsSalivary Glands, MinorReceptors, Antigen, B-CellB cellBCRIgA2pSSSjogren syndrome

Identifiers

PMID38454506
PMCPMC10918881
OpenAlexW4392559381

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.