Evidence map›Paper›PMID 38454332›Full record

ArticleBMC microbiology2024

Multidrug resistance among uropathogenic clonal group A E. Coli isolates from Pakistani women with uncomplicated urinary tract infections.

Ayesha Khan, Viqar Sayeed Saraf, Fariha Siddiqui, Tahira Batool, Zobia Noreen, Sundus Javed, Aftab Ahmad, Wadi B Alonazi, Muhammad Ibrahim, Sandra Pucciarelli and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Ayesha Khan *Microbiology and Public Health Laboratory, Department of Biosciences, COMSATS University Islamabad, Islamabad, Pakistan.
Viqar Sayeed Saraf *Microbiology and Public Health Laboratory, Department of Biosciences, COMSATS University Islamabad, Islamabad, Pakistan.
Fariha SiddiquiDepartment of Biosciences, Shifa Tameer e Millat University, Islamabad, Pakistan.
Tahira BatoolMicrobiology and Public Health Laboratory, Department of Biosciences, COMSATS University Islamabad, Islamabad, Pakistan.
Zobia NoreenMicrobiology and Public Health Laboratory, Department of Biosciences, COMSATS University Islamabad, Islamabad, Pakistan.
Sundus JavedMicrobiology and Public Health Laboratory, Department of Biosciences, COMSATS University Islamabad, Islamabad, Pakistan.
Aftab AhmadDepartment of Microbiology, Kohsar University Murree, Rawalpindi, Punjab, Pakistan.
Wadi B AlonaziHealth Administration Department, College of Business Administration, King Saud University, Riyadh, Saudi Arabia.
Muhammad IbrahimDepartment of Microbiology, Kohsar University Murree, Rawalpindi, Punjab, Pakistan. ibrahim@cuisahiwal.edu.pk.
Sandra PucciarelliSchool of Biosciences and Veterinary Medicine, University of Camerino, via Gentile III da Varano, Camerino, 62032, Italy.
Habib BokhariDepartment of Microbiology, Kohsar University Murree, Rawalpindi, Punjab, Pakistan. vc@kum.edu.pk.
COMSATS University Islamabad · PKKing Saud University · SAKohsar University MurreeShifa Tameer-e-Millat University · PKUniversità di Camerino · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveMulti-drug resistance (MDR) has notably increased in community acquired uropathogens causing urinary tract infections (UTIs), predominantly Escherichia coli. Uropathogenic E. coli causes 80% of uncomplicated community acquired UTIs, particularly in pre-menopausal women. Considering this high prevalence and the potential to spread antimicrobial resistant genes, the current study was conducted to investigate the presence of clinically important strains of E. coli in Pakistani women having uncomplicated cystitis and pyelonephritis. Women belonging to low-income groups were exclusively included in the study. Seventy-four isolates from urine samples were processed, phylotyped, and screened for the presence of two Single Nucleotide Polymorphisms (SNPs) particularly associated with a clinically important clonal group A of E. coli (CgA) followed by antibiotic susceptibility testing and genome sequence analysis.

resultsPhylogroup B2 was most prevalent in patients and 44% of isolates were positive for the presence of CgA specific SNPs in Fumarate hydratase and DNA gyrase subunit B genes. Antibiotic susceptibility testing showed widespread resistance to trimethoprim-sulfamethoxazole and extended-spectrum beta-lactamase production. The infection analysis revealed the phylogroup B2 to be more pathogenic as compared to the other groups. The genome sequence of E. coli strain U17 revealed genes encoding virulence, multidrug resistance, and host colonization mechanisms.

conclusionsOur research findings not only validate the significant occurrence of multidrug-resistant clonal group A E. coli (CgA) in premenopausal Pakistani women suffering from cystitis and pyelonephritis but also reveal the presence of genes associated withvirulence, and drug efflux pumps. The detection of highly pathogenic, antimicrobial-resistant phylogroup B2 and CgA E. coli strains is likely to help in understanding the epidemiology of the pathogen and may ultimately help to reduce the impact of these strains on human health. Furthermore, the findings of this study will particularly help to reduce the prevalence of uncomplicated UTIs and the cost associated with their treatment in women belonging to low-income groups.

Indexed as

CystitisEscherichia coli InfectionsPyelonephritisUrinary Tract InfectionsUropathogenic Escherichia coliAnti-Bacterial AgentsDrug Resistance, MultipleEscherichia coliFemaleHumansPakistanAnti-Bacterial AgentsE. ColiGalleria infection modelLow-income groupPhylotypesPremenopausal womenUrinary tract infections

Identifiers

PMID38454332
PMCPMC10919050
OpenAlexW4392559836

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.