Evidence map›Paper›PMID 38454009›Full record

ArticleInternational journal of obesity (2005)2024

Obesity affects brain cortex gene expression in an APOE genotype and sex dependent manner.

Harshul Pandit, Nahdia S Jones, G William Rebeck

Abstract read
In one paragraph

Article in International journal of obesity (2005), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Harshul PanditDepartment of Neuroscience, Georgetown University Medical Center, 3970 Reservoir Road N.W., Washington, DC, 20007, USA.ORCID 0000-0002-0198-9303
Nahdia S JonesDepartment of Neuroscience, Georgetown University Medical Center, 3970 Reservoir Road N.W., Washington, DC, 20007, USA.
G William RebeckDepartment of Neuroscience, Georgetown University Medical Center, 3970 Reservoir Road N.W., Washington, DC, 20007, USA. gwr2@georgetown.edu.

Funding

APOE4 promotes pathogenesis in a mouse model of cancer chemotherapy-induced cognitive impairmentR01AG067258 · NIA · GEORGETOWN UNIVERSITY · PI REBECK, G WILLIAM · 2020 to 2024
$2.1M
APOE isoform affects protein structure and function in normal brainR01NS100704 · NINDS · GEORGETOWN UNIVERSITY · PI REBECK, G WILLIAM · 2017 to 2021
$2.0M
Synergistic effect of APOE genotype and obesity in CNS inflammation and risk of Alzheimer's diseaseR21AG074139 · NIA · GEORGETOWN UNIVERSITY · PI REBECK, G WILLIAM · 2021 to 2022
$429k
NIA NIH HHS R01 AG067258NIA NIH HHS R21 AG074139NINDS NIH HHS R01 NS100704
6 · The paper itself

Abstract

objectiveObesity is the top modifiable risk factor for Alzheimer's disease. We hypothesized that high fat diet (HFD)-induced obesity alters brain transcriptomics in APOE-genotype and sex dependent manners. Here, we investigated interactions between HFD, APOE, and sex, using a knock-in mouse model of the human APOE3 and APOE4 alleles.

methodsSix-month-old APOE3-TR and APOE4-TR mice were treated with either HFD or control chow. After 4 months, total RNA was extracted from the cerebral cortices and analyzed by poly-A enriched RNA sequencing on the Illumina platform.

resultsFemale mice demonstrated profound HFD-induced transcriptomic changes while there was little to no effect in males. In females, APOE3 brains demonstrated about five times more HFD-induced transcriptomic changes (399 up-regulated and 107 down-regulated genes) compared to APOE4 brains (30 up-regulated and 60 down-regulated). Unsupervised clustering analysis revealed two gene sets that responded to HFD in APOE3 mice but not in APOE4 mice. Pathway analysis demonstrated that HFD in APOE3 mice affected cortical pathways related to feeding behavior, blood circulation, circadian rhythms, extracellular matrix, and cell adhesion.

conclusionsFemale mice and APOE3 mice have the strongest cortical transcriptomic responses to HFD related to feeding behavior and extracellular matrix remodeling. The relative lack of response of the APOE4 brain to stress associated with obesity may leave it more susceptible to additional stresses that occur with aging and in AD.

Indexed as

Cerebral CortexDiet, High-FatObesityAnimalsApolipoprotein E3Apolipoprotein E4Apolipoproteins EDisease Models, AnimalFemaleGene ExpressionGenotypeHumansMaleMiceMice, TransgenicSex FactorsApoE protein, humanApolipoprotein E3Apolipoprotein E4Apolipoproteins E

Identifiers

PMID38454009
PMCPMC11379128

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.