Evidence map›Paper›PMID 38452102›Full record

SynthesisPLoS biology2024

FAM81A is a postsynaptic protein that regulates the condensation of postsynaptic proteins via liquid-liquid phase separation.

Takeshi Kaizuka, Taisei Hirouchi, Takeo Saneyoshi, Toshihiko Shirafuji, Mark O Collins, Seth G N Grant, Yasunori Hayashi, Toru Takumi

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in PLoS biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Takeshi KaizukaRIKEN Brain Science Institute, Wako, Saitama, Japan.
Taisei HirouchiDepartment of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto, Japan.ORCID 0000-0003-4667-0694
Takeo SaneyoshiDepartment of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto, Japan.
Toshihiko ShirafujiDepartment of Physiology and Cell Biology, Kobe University School of Medicine, Kobe, Chuo, Kobe, Japan.
Mark O CollinsSchool of Biosciences, University of Sheffield, Sheffield, United Kingdom.ORCID 0000-0002-7656-4975
Seth G N GrantCentre for Clinical Brain Sciences, Chancellor's Building, Edinburgh BioQuarter, University of Edinburgh, Edinburgh, United Kingdom.
Yasunori HayashiDepartment of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto, Japan.ORCID 0000-0002-7560-3004
Toru TakumiRIKEN Brain Science Institute, Wako, Saitama, Japan.ORCID 0000-0001-7153-266X
Kyoto University · JPRIKEN Center for Brain Science · JPKobe University · JPUniversity of Edinburgh · GBUniversity of Sheffield · GB

Funding

Japan Agency for Medical Research and Development (AMED)KAKENHIMinistry of Education, Culture, Sports, Science, and Technology (MEXT)
6 · The paper itself

Abstract

Proteome analyses of the postsynaptic density (PSD), a proteinaceous specialization beneath the postsynaptic membrane of excitatory synapses, have identified several thousands of proteins. While proteins with predictable functions have been well studied, functionally uncharacterized proteins are mostly overlooked. In this study, we conducted a comprehensive meta-analysis of 35 PSD proteome datasets, encompassing a total of 5,869 proteins. Employing a ranking methodology, we identified 97 proteins that remain inadequately characterized. From this selection, we focused our detailed analysis on the highest-ranked protein, FAM81A. FAM81A interacts with PSD proteins, including PSD-95, SynGAP, and NMDA receptors, and promotes liquid-liquid phase separation of those proteins in cultured cells or in vitro. Down-regulation of FAM81A in cultured neurons causes a decrease in the size of PSD-95 puncta and the frequency of neuronal firing. Our findings suggest that FAM81A plays a crucial role in facilitating the interaction and assembly of proteins within the PSD, and its presence is important for maintaining normal synaptic function. Additionally, our methodology underscores the necessity for further characterization of numerous synaptic proteins that still lack comprehensive understanding.

Indexed as

Phase SeparationProteomeDisks Large Homolog 4 ProteinSynapsesSynaptic MembranesDisks Large Homolog 4 ProteinProteome

Identifiers

PMID38452102
PMCPMC10919877
OpenAlexW4392544543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.