Evidence map›Paper›PMID 38451972›Full record

ArticlePloS one2024

Transcriptome analysis reveals organ-specific effects of 2-deoxyglucose treatment in healthy mice.

Ann E Wells, John J Wilson, Sarah E Heuer, John D Sears, Jian Wei, Raghav Pandey, Mauro W Costa, Catherine C Kaczorowski, Derry C Roopenian, Chih-Hao Chang and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Ann E WellsThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0002-9720-0038
John J WilsonThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0001-7678-3062
Sarah E HeuerThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0003-4461-2386
John D SearsThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0002-4713-2241
Jian WeiDepartment of Physiology and Pathophysiology, School of Basic Medical Sciences, Shandong University, Jinan, Shandong, China.ORCID 0000-0002-4368-9763
Raghav PandeyThe Jackson Laboratory, Bar Harbor, ME, United States of America.
Mauro W CostaThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0003-3579-8625
Catherine C KaczorowskiThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0001-5430-0816
Derry C RoopenianThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0001-8409-7214
Chih-Hao ChangThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0002-0139-7439
Gregory W CarterThe Jackson Laboratory, Bar Harbor, ME, United States of America.ORCID 0000-0002-2834-8186
Jackson Laboratory · USTufts University · USShandong University · CN

Funding

Methods and Tools to Analyze Genetic ComplexityR01GM115518 · NIGMS · JACKSON LABORATORY · PI CARTER, GREGORY W · 2016 to 2020
$2.1M
NIGMS NIH HHS R01 GM115518
6 · The paper itself

Abstract

objectiveGlycolytic inhibition via 2-deoxy-D-glucose (2DG) has potential therapeutic benefits for a range of diseases, including cancer, epilepsy, systemic lupus erythematosus (SLE), and rheumatoid arthritis (RA), and COVID-19, but the systemic effects of 2DG on gene function across different tissues are unclear.

methodsThis study analyzed the transcriptional profiles of nine tissues from C57BL/6J mice treated with 2DG to understand how it modulates pathways systemically. Principal component analysis (PCA), weighted gene co-network analysis (WGCNA), analysis of variance, and pathway analysis were all performed to identify modules altered by 2DG treatment.

resultsPCA revealed that samples clustered predominantly by tissue, suggesting that 2DG affects each tissue uniquely. Unsupervised clustering and WGCNA revealed six distinct tissue-specific modules significantly affected by 2DG, each with unique key pathways and genes. 2DG predominantly affected mitochondrial metabolism in the heart, while in the small intestine, it affected immunological pathways.

conclusionsThese findings suggest that 2DG has a systemic impact that varies across organs, potentially affecting multiple pathways and functions. The study provides insights into the potential therapeutic benefits of 2DG across different diseases and highlights the importance of understanding its systemic effects for future research and clinical applications.

Indexed as

DeoxyglucoseEpilepsyAnimalsGene Expression ProfilingGlucoseMiceMice, Inbred C57BLDeoxyglucoseGlucose

Identifiers

PMID38451972
PMCPMC10919611
OpenAlexW4392563872

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.