Evidence map›Paper›PMID 38451436›Full record

ArticleMolecular neurobiology2024

Interferon Regulatory Factor 5 Gene Polymorphisms and mRNA Expression Levels Are Associated with Neuromyelitis Optica Spectrum Disorder.

Gaoning Wang, Liu Jing, Ying Wang, Arshad Mehmood, Huining Zhang, Ruoyi Guo, Lu Zhang, Bin Li

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Article in Molecular neurobiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Immune dysregulation and epileptogenesis.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Gaoning WangDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Liu JingDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Ying WangDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Arshad MehmoodDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Huining ZhangDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Ruoyi GuoDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Lu ZhangDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China.
Bin LiDepartment of Neurology, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, Hebei, China. jack511@163.com.
Second Hospital of Hebei Medical University · CNHebei Medical University · CN

Funding

Hebei Natural Science Foundation H2022206483S&T Program of Hebei 22377711D
6 · The paper itself

Abstract

Interferon regulatory factor 5 (IRF5) is a critical transcription factor in the toll-like receptor signaling pathway. It is associated with autoimmune disorders, such as rheumatoid arthritis, systemic lupus erythematosus, and inflammatory bowel disease. However, the relationship between the functional single nucleotide polymorphisms (SNPs) of IRF5 and its mRNA expression level in patients with neuromyelitis optica spectrum disorder remains unclear. The present study aimed to investigate the relationship between polymorphisms and mRNA expression levels of the IRF5 gene with the incidence of neuromyelitis optica spectrum disorder (NMOSD) in northern Chinese Han people. Two loci of the IRF5 gene (rs2004640 and rs2280714) of 164 patients with NMOSD and 269 healthy subjects were genotyped using the multiple SNaPshot technique. The frequencies of alleles, genotypes, and haplotypes were compared. Stratified analysis was performed according to age, sex, AQP4 status, onset age, and Expanded Disability Status Scale (EDSS) score. The IRF5 mRNA levels in peripheral blood mononuclear cells (PBMCs) of 64 NMOSD patients (32 patients in the acute stage and 32 patients in the remission stage) and 35 healthy subjects were detected by real-time PCR. The association of SNP polymorphisms with the mRNA expression level was determined by nonparametric tests. Allele and genotype frequency distributions of rs2004640 showed significant differences between both groups. Compared to healthy controls, the frequency of rs2004640 T allele markedly increased in patients (OR = 1.51, 95% CI = 1.09-2.08, P = 0.005). Minor allele T and GT genotype of rs2004640 that significantly increases the risk of NMOSD were discovered using genetic inheritance models (codominant, dominant, and overdominant) and haplotype analyses. Subsequent haplotype analyses revealed that the major haplotype "T-A" containing the risk alleles (the SNP sequence of the alleles was rs2004640 and rs2280714) had adverse effects on NMOSD. Based on the stratification analysis according to the EDSS score, the GT genotype frequency in the EDSS ≥ 4 group (38.2%) was markedly lower than that in the EDSS < 4 group (61.8%) (OR = 0.32, 95% CI = 0.15-0.68, P = 0.0054), with a significant difference. The IRF5 mRNA expression level was increased in NMOSD patients compared to that in normal subjects. IRF5 gene polymorphisms may be tightly associated with the genesis and progression of NMOSD in northern Chinese Han people. IRF5 mRNA expression was increased in patients with NMOSD and significantly increased in patients with acute phase. Perhaps IRF5 expression levels can be used as a predictor of disease activity in the future.

Indexed as

Genetic Predisposition to DiseaseInterferon Regulatory FactorsNeuromyelitis OpticaAdultAllelesCase-Control StudiesEast Asian PeopleFemaleGene FrequencyGenetic Association StudiesHaplotypesHumansMaleMiddle AgedPolymorphism, Single NucleotideRNA, MessengerInterferon Regulatory FactorsIRF5 protein, humanRNA, MessengerInterferon regulatory factor 5mRNANeuromyelitis optica spectrum disorderSingle nucleotide polymorphisms

Identifiers

PMID38451436
OpenAlexW4392557933

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.