Evidence map›Paper›PMID 38451333›Full record

ArticleArchives of virology2024

The complete genome sequence of tomato necrotic ringspot virus in chilli in Thailand derived from next-generation sequencing.

Phoowanarth Maneechoat, Pissawan Chiemsombat, Salvador Lopez, Scott Adkins

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Phoowanarth ManeechoatPlant Protection Research and Development Office, Department of Agriculture, Ministry of Agriculture and Cooperatives, 50 Phaholyothin Road, Lat Yao, Chatuchak, Bangkok, 10900, Thailand.
Pissawan ChiemsombatDepartment of Plant Pathology, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, 1 Malaiman Road, Kamphaeng Saen District, Nakhon Pathom, 73140, Thailand. agrpwc@ku.ac.th.ORCID http://orcid.org/0000-0002-1670-2184
Salvador LopezAgricultural Research Service, United States Horticultural Research Laboratory, 2001 South Rock Road, Fort Pierce, FL, 34945, USA.
Scott AdkinsAgricultural Research Service, United States Horticultural Research Laboratory, 2001 South Rock Road, Fort Pierce, FL, 34945, USA.

Funding

Ministry of Agriculture and Cooperatives 03-30-60-01-02-02-07-62
6 · The paper itself

Abstract

Tomato necrotic ringspot virus (TNRV) was first reported in Thailand in 2011, where it continues to reduce the yield and quality of pepper and tomato crops. Here, we report the complete genome sequence of TNRV isolate chilli-CR derived from next-generation sequencing. The TNRV genome comprises 16,595 nucleotides (nt) on three RNA segments. The L RNA is 8,858 nt, the M RNA is 4,724 nt, and the S RNA is 3,013 nt in length. The genome structure and organization are typical of orthotospoviruses, encoding five proteins, named L, NSm, G

Indexed as

NepovirusSolanum lycopersicumHigh-Throughput Nucleotide SequencingNecrosisNucleotidesPhylogenyRNAThailandNucleotidesRNA

Identifiers

PMID38451333

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.