Evidence map›Paper›PMID 38446666›Full record

ArticleCell reports2024

LPD-3 as a megaprotein brake for aging and insulin-mTOR signaling in C. elegans.

Taruna Pandey, Bingying Wang, Changnan Wang, Jenny Zu, Huichao Deng, Kang Shen, Goncalo Dias do Vale, Jeffrey G McDonald, Dengke K Ma

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. International journal of molecular sciences · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Taruna PandeyCardiovascular Research Institute and Department of Physiology, University of California San Francisco, San Francisco, CA, USA.
Bingying WangCardiovascular Research Institute and Department of Physiology, University of California San Francisco, San Francisco, CA, USA.
Changnan WangCardiovascular Research Institute and Department of Physiology, University of California San Francisco, San Francisco, CA, USA.
Jenny ZuCardiovascular Research Institute and Department of Physiology, University of California San Francisco, San Francisco, CA, USA.
Huichao DengDepartment of Biology, Howard Hughes Medical Institute, Stanford University, Stanford, CA, USA.
Kang ShenDepartment of Biology, Howard Hughes Medical Institute, Stanford University, Stanford, CA, USA.
Goncalo Dias do ValeCenter for Human Nutrition and Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Jeffrey G McDonaldCenter for Human Nutrition and Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Dengke K MaCardiovascular Research Institute and Department of Physiology, University of California San Francisco, San Francisco, CA, USA; Innovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA. Electronic address: dengke.ma@ucsf.edu.
University of California, San Francisco · USHoward Hughes Medical Institute · USThe University of Texas Southwestern Medical Center · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI JAY D. HORTON · 2022 to 2026
$7.4M
Genetic pathway and cellular mechanism underlying organismic responses to hypoxia and hypothermiaR35GM139618 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Dengke Ma · 2021 to 2026
$2.3M
NIDDK NIH HHS P30 DK127984NIGMS NIH HHS R35 GM139618NIH HHS P40 OD010440
6 · The paper itself

Abstract

Insulin-mechanistic target of rapamycin (mTOR) signaling drives anabolic growth during organismal development; its late-life dysregulation contributes to aging and limits lifespans. Age-related regulatory mechanisms and functional consequences of insulin-mTOR remain incompletely understood. Here, we identify LPD-3 as a megaprotein that orchestrates the tempo of insulin-mTOR signaling during C. elegans aging. We find that an agonist insulin, INS-7, is drastically overproduced from early life and shortens lifespan in lpd-3 mutants. LPD-3 forms a bridge-like tunnel megaprotein to facilitate non-vesicular cellular lipid trafficking. Lipidomic profiling reveals increased hexaceramide species in lpd-3 mutants, accompanied by up-regulation of hexaceramide biosynthetic enzymes, including HYL-1. Reducing the abundance of HYL-1, insulin receptor/DAF-2 or mTOR/LET-363, normalizes INS-7 levels and rescues the lifespan of lpd-3 mutants. LPD-3 antagonizes SINH-1, a key mTORC2 component, and decreases expression with age. We propose that LPD-3 acts as a megaprotein brake for organismal aging and that its age-dependent decline restricts lifespan through the sphingolipid-hexaceramide and insulin-mTOR pathways.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAgingAnimalsForkhead Transcription FactorsInsulinLongevityTOR Serine-Threonine KinasesCaenorhabditis elegans ProteinsForkhead Transcription FactorsInsulinlpd-3 protein, C elegansTOR Serine-Threonine KinasesagingCaenorhabditis elegansCP: MetabolismCP: Molecular biologyhexaceramidehyperfunctionIIS-mTORINS-7LPD-3mitochondrial pathwaymolecular damagessphingolipid

Identifiers

PMID38446666
PMCPMC11019932
OpenAlexW4392453583

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.