ArticleEnvironmental microbiology reports2024
Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies.
Article in Environmental microbiology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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Who cites it
4 citing papers in PubMed, 4 citations in OpenAlex.
- A dataset for forty complete bacterial genome sequences in cultures of the toxic dinoflagellateData in brief · 2026Article
- Unraveling the bacterial composition of a coral and bioeroding sponge competing in a marginal coral environment.Frontiers in microbiology · 2025Article
- The chromosomal genome sequence of the spongeWellcome open research · 2025Article
- Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies.Environmental microbiology reports · 2024Article
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Authors and funding
4 authors at 3 institutions in 2 countries.
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Abstract
Bacterial-algal interactions strongly influence marine ecosystems. Bacterial communities in cultured dinoflagellates of the family Symbiodiniaceae have been characterized by metagenomics. However, little is known about whole-genome analysis of marine bacteria associated with these dinoflagellates. We performed in silico analysis of four bacterial genomes from cultures of four dinoflagellates of the genera Symbiodinium, Breviolum, Cladocopium and Durusdinium. Comparative analysis showed that the former three contain the alphaproteobacterial family Parvibaculaceae and that the Durusdinium culture includes the family Sphingomonadaceae. There were no large genomic reductions in the alphaproteobacteria with genome sizes of 2.9-3.9 Mb, implying they are not obligate intracellular bacteria. Genomic annotations of three Parvibaculaceae detected the gene for diacetylchitobiose deacetylase (Dac), which may be involved in the degradation of dinoflagellate cell surfaces. They also had metabolic genes for dissimilatory nitrate reduction to ammonium (DNRA) in the nitrogen (N) cycle and cobalamin (vitamin B
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