Evidence map›Paper›PMID 38443790›Full record

ArticleBMC genomics2024

The first Cyclospora cayetanensis lineage A genome from an isolate from Mexico.

Monica Santin, Aleksey Molokin, Guadalupe E Orozco-Mosqueda, Sonia Almeria, Jenny Maloney

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In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Monica SantinEnvironmental Microbial and Food Safety Laboratory, Agricultural Research Service, Department of Agriculture, 20705, Beltsville, MD, USA.
Aleksey MolokinEnvironmental Microbial and Food Safety Laboratory, Agricultural Research Service, Department of Agriculture, 20705, Beltsville, MD, USA.
Guadalupe E Orozco-MosquedaHospital Infantil de Morelia Eva Sámano de López Mateos, Servicio de Salud de Michoacán, 58020, Morelia, Michoacán, México.
Sonia AlmeriaU.S. Food and Drug Administration, Center for Food Safety and Applied Nutrition, Office of Applied Research and Safety Assessment, Division of Virulence Assessment, 20708, Laurel, MD, USA.
Jenny MaloneyEnvironmental Microbial and Food Safety Laboratory, Agricultural Research Service, Department of Agriculture, 20705, Beltsville, MD, USA. jenny.maloney@usda.gov.

Funding

Agricultural Research Service 8042-32000-112-00-D
6 · The paper itself

Abstract

backgroundCyclospora cayetanensis is a protozoan parasite that causes intestinal illness in humans worldwide. Despite its global distribution, most genomic data for C. cayetanensis has been obtained from isolates collected in the United States, leaving genetic variability among globally distributed isolates underexplored.

resultsIn the present study, the genome of an isolate of C. cayetanensis obtained from a child with diarrhea living in Mexico was sequenced and assembled. Evaluation of the assembly using a lineage typing system recently developed by the Centers for Disease Control and Prevention revealed that this isolate is lineage A.

conclusionsGiven that the only other whole genome assembly available from Mexico was classified as lineage B, the data presented here represent an important step in expanding our knowledge of the diversity of C. cayetanensis isolates from Mexico at the genomic level.

Indexed as

CyclosporaChildDiarrheaGenomicsHumansMexicoCyclospora cayetanensisGenomeLineage AMexico

Identifiers

PMID38443790
PMCPMC10913667

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.