Evidence map›Paper›PMID 38443414›Full record

ArticleScientific reports2024

Single-polyp metabolomics for coral health assessment.

Akira Iguchi, Mariko Iijima, Nanami Mizusawa, Yoshikazu Ohno, Ko Yasumoto, Atsushi Suzuki, Shunichi Suga, Ken Tanaka, Kei Zaitsu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Akira IguchiGeological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan. iguchi.a@aist.go.jp.
Mariko IijimaGeological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan.
Nanami MizusawaSchool of Marine Biosciences, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa, 252-0373, Japan.
Yoshikazu OhnoSchool of Marine Biosciences, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa, 252-0373, Japan.
Ko YasumotoSchool of Marine Biosciences, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa, 252-0373, Japan.
Atsushi SuzukiGeological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan.
Shunichi SugaResearch Laboratories, KOSÉ Corporation, 48-18, Sakae-cho, Kita-ku, Tokyo, 114-0005, Japan.
Ken TanakaResearch Laboratories, KOSÉ Corporation, 48-18, Sakae-cho, Kita-ku, Tokyo, 114-0005, Japan.
Kei ZaitsuMultimodal Informatics and Wide-Data Analytics Laboratory (MiWA-Lab.), Faculty of Biology-Oriented Science and Technology, Kindai University, Nishimitani, Kinokawa, Wakayama, 649-6493, Japan. kzaitsu@waka.kindai.ac.jp.
Geological Survey of Japan · JPKitasato University · JPKOSÉ (Japan) · JPKindai University · JP

Funding

Japan Society for the Promotion of Science 19K22938
6 · The paper itself

Abstract

Coral reef ecosystems supported by environmentally sensitive reef-building corals face serious threats from human activities. Our understanding of these reef threats is hampered by the lack of sufficiently sensitive coral environmental impact assessment systems. In this study, we established a platform for metabolomic analysis at the single-coral-polyp level using state-of-the-art mass spectrometry (probe electrospray ionization/tandem mass spectrometry; PESI/MS/MS) capable of fine-scale analysis. We analyzed the impact of the organic UV filter, benzophenone (BP), which has a negative impact on corals. We also analyzed ammonium and nitrate samples, which affect the environmental sensitivity of coral-zooxanthella (Symbiodiniaceae) holobionts, to provide new insights into coral biology with a focus on metabolites. The method established in this study breaks new ground by combining PESI/MS/MS with a technique for coral polyps that can control the presence or absence of zooxanthellae in corals, enabling functions of zooxanthellae to be assessed on a polyp-by-polyp basis for the first time. This system will clarify biological mechanisms of corals and will become an important model system for environmental impact assessment using marine organisms.

Indexed as

AnthozoaDinoflagellidaPolypsAnimalsCoral ReefsEcosystemHumansTandem Mass Spectrometry

Identifiers

PMID38443414
PMCPMC10914721
OpenAlexW4392471413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.