Evidence map›Paper›PMID 38442862›Full record

ArticleJournal of the Royal Society, Interface2024

Parameter identifiability and model selection for partial differential equation models of cell invasion.

Yue Liu, Kevin Suh, Philip K Maini, Daniel J Cohen, Ruth E Baker

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
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  9. Actin network heterogeneity tunes activator-inhibitor dynamics at the cell cortex.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  11. Review
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  14. Identifiability and model selection frameworks for models of high-grade glioma response to chemoradiation.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yue LiuMathematical Institute, University of Oxford, Oxford, UK.ORCID 0000-0001-8661-3294
Kevin SuhDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-7712-0279
Philip K MainiMathematical Institute, University of Oxford, Oxford, UK.ORCID 0000-0002-0146-9164
Daniel J CohenDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-5819-1135
Ruth E BakerMathematical Institute, University of Oxford, Oxford, UK.ORCID 0000-0002-6304-9333

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

When employing mechanistic models to study biological phenomena, practical parameter identifiability is important for making accurate predictions across wide ranges of unseen scenarios, as well as for understanding the underlying mechanisms. In this work, we use a profile-likelihood approach to investigate parameter identifiability for four extensions of the Fisher-Kolmogorov-Petrovsky-Piskunov (Fisher-KPP) model, given experimental data from a cell invasion assay. We show that more complicated models tend to be less identifiable, with parameter estimates being more sensitive to subtle differences in experimental procedures, and that they require more data to be practically identifiable. As a result, we suggest that parameter identifiability should be considered alongside goodness-of-fit and model complexity as criteria for model selection.

Indexed as

MustelidaeAnimalsLikelihood FunctionsResearch Designcell invasionmodel selectionparameter identifiabilityprofile likelihoodreaction–diffusion

Identifiers

PMID38442862
PMCPMC10914513

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.