Evidence map›Paper›PMID 38442151›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

The herpesvirus UL49.5 protein hijacks a cellular C-degron pathway to drive TAP transporter degradation.

Magda Wąchalska, Celeste Riepe, Magdalena J Ślusarz, Małgorzata Graul, Lukasz S Borowski, Wenjie Qiao, Michalina Foltyńska, Jan E Carette, Krystyna Bieńkowska-Szewczyk, Roman J Szczesny and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Degrons: defining the rules of protein degradation.Nature reviews. Molecular cell biology · 2025
    Review
  6. Structurally diverse viral inhibitors converge on a shared mechanism to stall the antigen transporter TAP.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. A Structural Atlas of TAP Inhibition by Herpesviruses and Poxviruses.bioRxiv : the preprint server for biology · 2025
    Article
  8. bioRxiv : the preprint server for biology · 2025
    Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Magda WąchalskaLaboratory of Virus Molecular Biology, Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Gdańsk 80-307, Poland.ORCID 0000-0003-0429-888X
Celeste RiepeDepartment of Biology, Stanford University, Stanford, CA 94305.
Magdalena J ŚlusarzDepartment of Theoretical Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk 80-308, Poland.ORCID 0000-0002-9411-4679
Małgorzata GraulLaboratory of Virus Molecular Biology, Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Gdańsk 80-307, Poland.ORCID 0000-0002-4769-1991
Lukasz S BorowskiInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw 02-106, Poland.
Wenjie QiaoDepartment of Microbiology and Immunology, Stanford University, Stanford, CA 94305.ORCID 0000-0002-0255-6155
Michalina FoltyńskaLaboratory of Virus Molecular Biology, Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Gdańsk 80-307, Poland.
Jan E CaretteDepartment of Microbiology and Immunology, Stanford University, Stanford, CA 94305.ORCID 0000-0002-5187-8070
Krystyna Bieńkowska-SzewczykLaboratory of Virus Molecular Biology, Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Gdańsk 80-307, Poland.
Roman J SzczesnyInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw 02-106, Poland.ORCID 0000-0002-0686-1632
Ron R KopitoDepartment of Biology, Stanford University, Stanford, CA 94305.ORCID 0000-0001-5027-6935
Andrea D LipińskaLaboratory of Virus Molecular Biology, Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Gdańsk 80-307, Poland.ORCID 0000-0002-8115-9499
Gdańsk Medical University · PLStanford University · USInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLUniversity of Gdańsk · PLUniversity of Warsaw · PL

Funding

The Ubiquitin Proteasome System in Quality ControlR01GM074874 · NIGMS · STANFORD UNIVERSITY · PI KOPITO, RON R · 2006 to 2022
$8.0M
Protein Aggregation and Inclusion Body FormationR01NS042842 · NINDS · STANFORD UNIVERSITY · PI KOPITO, RON R · 2002 to 2016
$6.1M
Protein Aggregation and Inclusion Body FormationR56NS042842 · NINDS · STANFORD UNIVERSITY · PI KOPITO, RON R · 2007 to 2019
$1.1M
Four Laser, 18 Color Cell Sorter in the SSFFS10RR025518 · NCRR · STANFORD UNIVERSITY · PI HERZENBERG, LEONARD A · 2009 to 2009
$500k
NCRR NIH HHS S10 RR025518NIGMS NIH HHS R01 GM074874NINDS NIH HHS R01 NS042842NINDS NIH HHS R56 NS042842
6 · The paper itself

Abstract

The transporter associated with antigen processing (TAP) is a key player in the major histocompatibility class I-restricted antigen presentation and an attractive target for immune evasion by viruses. Bovine herpesvirus 1 impairs TAP-dependent antigenic peptide transport through a two-pronged mechanism in which binding of the UL49.5 gene product to TAP both inhibits peptide transport and triggers its proteasomal degradation. How UL49.5 promotes TAP degradation has, so far, remained unknown. Here, we use high-content siRNA and genome-wide CRISPR-Cas9 screening to identify CLR2

Indexed as

ATP-Binding Cassette TransportersDegronsHerpesviridaeAntigen PresentationCytomegalovirusEndoplasmic Reticulum-Associated DegradationMembrane Transport ProteinsPeptidesUbiquitin-Protein LigasesATP-Binding Cassette TransportersMembrane Transport ProteinsPeptidestransporter associated with antigen processing (TAP)Ubiquitin-Protein LigasesCRL2ERADherpesvirusKLHDC3TAP transporter

Identifiers

PMID38442151
PMCPMC10945846
OpenAlexW4392451378

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.