Evidence map›Paper›PMID 38439674›Full record

ArticleMetallomics : integrated biometal science2024

Distinct function of Chlamydomonas CTRA-CTR transporters in Cu assimilation and intracellular mobilization.

Daniela Strenkert, Stefan Schmollinger, Srinand Paruthiyil, Bonnie C Brown, Sydnee Green, Catherine M Shafer, Patrice Salomé, Hosea Nelson, Crysten E Blaby-Haas, Jeffrey L Moseley and 1 more

Open access · greenAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Daniela StrenkertDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
Stefan SchmollingerDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
Srinand ParuthiyilCalifornia Institute for Quantitative Biosciences, University of California, Berkeley, CA 94720, USA.
Bonnie C BrownDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
Sydnee GreenDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
Catherine M ShaferMolecular Toxicology Inter-departmental Ph.D. program, University of California, Los Angeles, CA 90095, USA.
Patrice SaloméInstitute for Genomics and Proteomics, University of California, Los Angeles, CA 90095, USA.
Hosea NelsonDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
Crysten E Blaby-HaasDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.ORCID 0000-0002-1583-1291
Jeffrey L MoseleyCalifornia Institute for Quantitative Biosciences, University of California, Berkeley, CA 94720, USA.
Sabeeha S MerchantDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
QB3 · USUniversity of California, Los Angeles · USLawrence Berkeley National Laboratory · US

Funding

Nutritional Cu Signaling and HomeostasisR01GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SABEEHA MERCHANT · 1995 to 2026
$4.6M
Nutritional Copper Signaling and HomeostasisR37GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MERCHANT, SABEEHA · 2011 to 2020
$4.3M
CU-DEPENDENT TRANSCRIPTIONAL REGULATIONR29GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MERCHANT, SABEEHA · 1989 to 1993
–
NIGMS NIH HHS R01 GM042143NIGMS NIH HHS R37 GM042143NIH HHS GM42143
6 · The paper itself

Abstract

Successful acclimation to copper (Cu) deficiency involves a fine balance between Cu import and export. In the green alga Chlamydomonas reinhardtii, Cu import is dependent on a transcription factor, Copper Response Regulator 1 (CRR1), responsible for activating genes in Cu-deficient cells. Among CRR1 target genes are two Cu transporters belonging to the CTR/COPT gene family (CTR1 and CTR2) and a related soluble protein (CTR3). The ancestor of these green algal proteins was likely acquired from an ancient chytrid and contained conserved cysteine-rich domains (named the CTR-associated domains, CTRA) that are predicted to be involved in Cu acquisition. We show by reverse genetics that Chlamydomonas CTR1 and CTR2 are canonical Cu importers albeit with distinct affinities, while loss of CTR3 did not result in an observable phenotype under the conditions tested. Mutation of CTR1, but not CTR2, recapitulates the poor growth of crr1 in Cu-deficient medium, consistent with a dominant role for CTR1 in high-affinity Cu(I) uptake. On the other hand, the overaccumulation of Cu(I) (20 times the quota) in zinc (Zn) deficiency depends on CRR1 and both CTR1 and CTR2. CRR1-dependent activation of CTR gene expression needed for Cu over-accumulation can be bypassed by the provision of excess Cu in the growth medium. Over-accumulated Cu is sequestered into the acidocalcisome but can become remobilized by restoring Zn nutrition. This mobilization is also CRR1-dependent, and requires activation of CTR2 expression, again distinguishing CTR2 from CTR1 and consistent with the lower substrate affinity of CTR2. ONE SENTENCE SUMMARY: Regulation of Cu uptake and sequestration by members of the CTR family of proteins in Chlamydomonas.

Indexed as

ChlamydomonasCopperBiological TransportGene Expression RegulationMembrane Transport ProteinsCopperMembrane Transport Proteinsalgaecopper recyclinglysosome-related organelleSLC31A

Identifiers

PMID38439674
PMCPMC10959442
OpenAlexW4392470208

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.