Evidence map›Paper›PMID 38438770›Full record

ArticleJournal of assisted reproduction and genetics2024

Seminal cell-free DNA as a potential marker for in vitro fertility of Nellore bulls.

Margot A N Dode, Natalia Capobianco, Luna Nascimento Vargas, Bruna Mion, Nayara Ribeiro Kussano, José Felipe Spricigo, Mauricio Machaim Franco

Open access · greenAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Margot A N DodeInstitute of Biology, University of Brasilia, Brasília, DF, Brazil. margot.dode@embrapa.br.ORCID http://orcid.org/0000-0002-1096-0457
Natalia CapobiancoInstitute of Biology, University of Brasilia, Brasília, DF, Brazil.
Luna Nascimento VargasLaboratory of Animal Reproduction, Embrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Bruna MionDepartment of Animal Science, University of Guelph, Guelph, ON, Canada.
Nayara Ribeiro KussanoInstitute of Biology, University of Brasilia, Brasília, DF, Brazil.
José Felipe SpricigoSchool of Veterinary and Animal Science, Federal University of Goiás, Goiania, GO, Brazil.
Mauricio Machaim FrancoLaboratory of Animal Reproduction, Embrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Universidade de Brasília · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal de Goiás · BRUniversity of Guelph · CA

Funding

Fundação de Apoio à Pesquisa do Distrito Federal FAPDF - grant n° 019300001128
6 · The paper itself

Abstract

purposeThis study aimed to identify a marker for freezability and in vitro fertility of sperm samples before freezing.

methodsSemen was collected from nine Nelore bulls; half of the ejaculate was used for seminal plasma cell-free DNA (cfDNA) quantification, and the other half was cryopreserved. Evaluation of sperm movement using computer-assisted semen analysis and plasma membrane integrity and stability, acrosomal integrity, apoptosis, and mitochondrial potential using flow cytometry were performed on fresh and frozen/thawed semen at 0, 3, 6, and 12 h after thawing. Frozen/thawed sperm was also used for in vitro embryo production. cfDNA was extracted from each bull, and the total DNA and number of cell-free mitochondrial DNA (cfmtDNA) copies were quantified. Semen from each animal was used for IVF, and cleavage, blastocyst formation, and cell counts were evaluated.

resultsTwo groups were formed and compared based on the concentrations of cfDNA and cfmDNA present: low-cfDNA and high-cfDNA and low-cfmtDNA and high-cfmtDNA. Up to 12 h post-thawing, there were no differences between the groups in the majority of the sperm parameters evaluated. Cleavage, day 6 and 7 blastocyst rates, and the number of cells were higher in the high cfDNA group than in the low cfDNA group. Similar results were observed for cfmtDNA, except for the number of cells, which was similar between the groups.

conclusionThe concentration of cfDNA and the relative number of copies of cfmtDNA in seminal plasma cannot predict the freezability of semen but can be used to predict in vitro embryo production.

Indexed as

Cell-Free Nucleic AcidsCryopreservationFertilization in VitroSemenSemen AnalysisSemen PreservationSpermatozoaSperm MotilityAnimalsBiomarkersBlastocystCattleDNA, MitochondrialFertilityMaleBiomarkersCell-Free Nucleic AcidsDNA, MitochondrialCryopreservationmtDNA, in vitro embryo productionSperm

Identifiers

PMID38438770
PMCPMC11143116
OpenAlexW4392466751

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.