Evidence map›Paper›PMID 38438463›Full record

ArticleScientific reports2024

The minimum energy required to build a cell.

Edwin Ortega-Arzola, Peter M Higgins, Charles S Cockell

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Biomanufacturing Potential of Streamlined Cells.Biotechnology and bioengineering · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Bioenergetics and the Evolution of Cellular Traits.Annual review of biophysics · 2025
    Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Edwin Ortega-ArzolaUK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK. edwin.oa@icloud.com.
Peter M HigginsUK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK.
Charles S CockellUK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK.
University of Edinburgh · GBUniversity of Toronto · CA

Funding

Science and Technology Facilities Council ST/R000875/1
6 · The paper itself

Abstract

Understanding the energy requirements for cell synthesis accurately and comprehensively has been a longstanding challenge. We introduce a computational model that estimates the minimum energy necessary to build any cell from its constituent parts. This method combines omics and internal cell compositions from various sources to calculate the Gibbs Free Energy of biosynthesis independently of specific metabolic pathways. Our public tool, Synercell, can be used with other models for minumum species-specific energy estimations in any well-sequenced species. The energy for synthesising the genome, transcriptome, proteome, and lipid bilayer of four cell types: Escherichia coli, Saccharomyces cerevisiae, an average mammalian cell and JCVI-syn3A were estimated. Their modelled minimum synthesis energies at 298 K were

Indexed as

BiotechnologyProteomeAnimalsBiomassEscherichia coliExobiologyLipid BilayersMammalsSaccharomyces cerevisiaeLipid BilayersProteomeBiosynthesisGibbs energyGroup Contribution Algorithm (GCA)Virtual cell

Identifiers

PMID38438463
PMCPMC11306549
OpenAlexW4392375025

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.