Evidence map›Paper›PMID 38438443›Full record

ArticleScientific reports2024

Network topology mapping of chemical compounds space.

Georgios Tsekenis, Giulio Cimini, Marinos Kalafatis, Achille Giacometti, Tommaso Gili, Guido Caldarelli

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Georgios TsekenisInstitute for Complex Systems, National Research Council, Rome, Italy. geotsek@gmail.com.
Giulio CiminiPhysics Department and INFN, University of Rome Tor Vergata, Rome, Italy.
Marinos KalafatisDepartment of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Achille GiacomettiDepartment of Molecular Sciences and Nanosystems (DMSN), "Ca' Foscari" University of Venice, Venice, Italy.
Tommaso GiliNetworks Unit, IMT School for Advanced Studies Lucca, 55100, Lucca, Italy.
Guido CaldarelliInstitute for Complex Systems, National Research Council, Rome, Italy.
Ca' Foscari University of Venice · ITIMT School for Advanced Studies Lucca · ITNational Research Council · ITUniversity of Illinois Urbana-Champaign · USUniversity of Rome Tor Vergata · IT

Funding

EU 'HumanE-AI-Net' 952026Italian Ministry of Foreign Affairs and International Cooperation Mac2MicMIUR PRIN-COFIN2022 grant 2022JWAF7Y
6 · The paper itself

Abstract

We define bipartite and monopartite relational networks of chemical elements and compounds using two different datasets of inorganic chemical and material compounds, as well as study their topology. We discover that the connectivity between elements and compounds is distributed exponentially for materials, and with a fat tail for chemicals. Compounds networks show similar distribution of degrees, and feature a highly-connected club due to oxygen . Chemical compounds networks appear more modular than material ones, while the communities detected reveal different dominant elements specific to the topology. We successfully reproduce the connectivity of the empirical chemicals and materials networks by using a family of fitness models, where the fitness values are derived from the abundances of the elements in the aggregate compound data. Our results pave the way towards a relational network-based understanding of the inherent complexity of the vast chemical knowledge atlas, and our methodology can be applied to other systems with the ingredient-composite structure.

Identifiers

PMID38438443
PMCPMC10912673
OpenAlexW4391987562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.