Evidence map›Paper›PMID 38437679›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2024

A Pre-Leukemic DNA Methylation Signature in Healthy Individuals at Higher Risk for Developing Myeloid Malignancy.

Zhentang Lao, Ling-Wen Ding, Qiao-Yang Sun, Li Jia, Benedict Yan, Alvin Yu-Jin Ng, Sharah Mae Capinpin, Renwei Wang, Li Ying, Wee Joo Chng and 6 more

Open access · greenAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Zhentang Lao *Department of Haematology, Singapore General Hospital, Singapore, Singapore.ORCID 0000-0001-7757-0886
Ling-Wen Ding *Cancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0003-0022-1551
Qiao-Yang SunDepartment of Haematology, Singapore General Hospital, Singapore, Singapore.ORCID 0000-0002-7842-7034
Li JiaCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0001-8360-3912
Benedict YanDepartment of Laboratory Medicine, National University Hospital, Singapore, Singapore.ORCID 0000-0001-6530-5372
Alvin Yu-Jin NgMGI Tech Singapore. Ltd., Singapore, Singapore.ORCID 0000-0002-1744-6063
Sharah Mae CapinpinHealthy Longitudinal Translational Research Programme, Yong Loo Lin School of Medicine, National University of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0001-6759-1712
Renwei WangDivision of Cancer Control and Population Sciences, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0001-8871-7054
Li YingCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0002-9316-2521
Wee Joo ChngCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0003-2578-8335
H Phillip KoefflerNational University Cancer Institute, National University Health System, Singapore, Singapore.ORCID 0000-0001-5839-9913
Woon-Puay KohYong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.ORCID 0000-0002-4620-3108
Jian-Min YuanDivision of Cancer Control and Population Sciences, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0002-5674-6341
Henry Yang *Cancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0002-1155-8216
Yeow Tee Goh *Department of Haematology, Singapore General Hospital, Singapore, Singapore.ORCID 0000-0002-7069-0997
Nicholas Grigoropoulos *Department of Haematology, Singapore General Hospital, Singapore, Singapore.ORCID 0000-0002-8033-5024
National University of Singapore · SGSingapore General Hospital · SGCedars-Sinai Medical Center · USNational University Hospital · SGSingapore Institute of Technology · SGUniversity of Pittsburgh · USUPMC Hillman Cancer Center · US

Funding

Prospective studies of cancer etiology and prevention in Shanghai and SingaporeR01CA144034 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI YUAN, JIAN-MIN · 2010 to 2014
$7.0M
THE SINGAPORE COHORT STUDY OF DIET AND CANCERR01CA080205 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI YUAN, JIAN-MIN · 1999 to 2009
$5.3M
Cancer epidemiology cohorts in Shanghai and Singapore UM1CA182876 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI YUAN, JIAN-MIN · 2014 to 2018
$4.3M
National Medical Research Council (NMRC) MOH-OFIRG21nov-0007National Medical Research Council (NMRC) NMRC/Fellowship/0036/2016National Medical Research Council (NMRC) NMRC/TA/0051/2016NCI NIH HHS R01 CA080205NCI NIH HHS R01 CA144034NCI NIH HHS UM1 CA182876
6 · The paper itself

Abstract

purposeDNA methylation alterations are widespread in acute myelogenous leukemia (AML) and myelodysplastic syndrome (MDS), some of which appear to have evolved independently of somatic mutations in epigenetic regulators. Although the presence of somatic mutations in peripheral blood can predict the risk of development of AML and MDS, its accuracy remains unsatisfactory. EXPERIMENTAL

designWe performed global DNA methylation profiling in a case control study nested within the Singapore Chinese Health Study to evaluate whether DNA methylation alterations were associated with AML/MDS development. Targeted deep sequencing and methylated DNA immunoprecipitation sequencing (MeDIP-seq) were performed on peripheral blood collected a median of 9.9 years before diagnosis of AML or MDS, together with age-matched still-healthy individuals as controls.

resultsSixty-six individuals who developed AML or MDS displayed significant DNA methylation changes in the peripheral blood compared with 167 age- and gender-matched controls who did not develop AML/MDS during the follow-up period. Alterations in methylation in the differentially methylation regions were associated with increased odds of developing AML/MDS.

conclusionsThe epigenetic changes may be acquired independently and before somatic mutations that are relevant for AML/MDS development. The association between methylation changes and the risk of pre-AML/MDS in these individuals was considerably stronger than somatic mutations, suggesting that methylation changes could be used as biomarkers for pre-AML/MDS screening.

Indexed as

DNA MethylationLeukemia, Myeloid, AcuteMyelodysplastic SyndromesAdultAgedCase-Control StudiesEpigenesis, GeneticFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedMutationRisk FactorsSingapore

Identifiers

PMID38437679
PMCPMC11096012
OpenAlexW4392356514

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.