Evidence map›Paper›PMID 38436428›Full record

ArticleJournal of experimental botany2024

Four-dimensional quantitative analysis of cell plate development in Arabidopsis using lattice light sheet microscopy identifies robust transition points between growth phases.

Rosalie Sinclair, Minmin Wang, Muhammad Zaki Jawaid, Toshisangba Longkumer, Jesse Aaron, Blair Rossetti, Eric Wait, Kent McDonald, Daniel Cox, John Heddleston and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Rosalie SinclairDepartment of Plant Sciences, University of California Davis, Davis, CA, USA.ORCID 0000-0003-1616-3720
Minmin WangDepartment of Plant Sciences, University of California Davis, Davis, CA, USA.ORCID 0000-0001-9545-7895
Muhammad Zaki JawaidDepartment of Physics and Astronomy, University of California Davis, Davis, CA, USA.
Toshisangba LongkumerDepartment of Plant Sciences, University of California Davis, Davis, CA, USA.ORCID 0000-0002-7057-1197
Jesse AaronJanelia Research Campus, Ashburn, VA, USA.ORCID 0000-0002-7543-9590
Blair RossettiJanelia Research Campus, Ashburn, VA, USA.ORCID 0000-0003-2405-4209
Eric WaitJanelia Research Campus, Ashburn, VA, USA.ORCID 0000-0002-1614-9219
Kent McDonaldElectron Microscope Laboratory, University of California, Berkeley, CA, USA.
Daniel CoxDepartment of Physics and Astronomy, University of California Davis, Davis, CA, USA.
John HeddlestonJanelia Research Campus, Ashburn, VA, USA.ORCID 0000-0002-9289-4114
Thomas WilkopDepartment of Molecular and Cellular Biology, Light Microscopy Imaging Facility, University of California Davis, Davis, CA, USA.ORCID 0000-0001-9066-5513
Georgia DrakakakiDepartment of Plant Sciences, University of California Davis, Davis, CA, USA.ORCID 0000-0002-3949-8657
University of California, Davis · USJanelia Research Campus · USUniversity of California, Berkeley · US

Funding

Zeiss LSM 880 with Fast Mode Airyscan for the MCB LM Imaging FacilityS10OD026702 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI PADDY, MICHAEL R · 2019 to 2019
$600k
National Science Foundation MCB 1818219NIH HHS S10OD026702US Department of Agriculture Hatch CA-D-PLS-2132-H
6 · The paper itself

Abstract

Cell plate formation during cytokinesis entails multiple stages occurring concurrently and requiring orchestrated vesicle delivery, membrane remodelling, and timely deposition of polysaccharides, such as callose. Understanding such a dynamic process requires dissection in time and space; this has been a major hurdle in studying cytokinesis. Using lattice light sheet microscopy (LLSM), we studied cell plate development in four dimensions, through the behavior of yellow fluorescent protein (YFP)-tagged cytokinesis-specific GTPase RABA2a vesicles. We monitored the entire duration of cell plate development, from its first emergence, with the aid of YFP-RABA2a, in both the presence and absence of cytokinetic callose. By developing a robust cytokinetic vesicle volume analysis pipeline, we identified distinct behavioral patterns, allowing the identification of three easily trackable cell plate developmental phases. Notably, the phase transition between phase I and phase II is striking, indicating a switch from membrane accumulation to the recycling of excess membrane material. We interrogated the role of callose using pharmacological inhibition with LLSM and electron microscopy. Loss of callose inhibited the phase transitions, establishing the critical role and timing of the polysaccharide deposition in cell plate expansion and maturation. This study exemplifies the power of combining LLSM with quantitative analysis to decode and untangle such a complex process.

Indexed as

ArabidopsisCytokinesisGlucansMicroscopycalloseGlucans4D imagingCallosecell platecytokinesislattice light sheet microscopyplant cell divisionquantitative image analysisRABA2a

Identifiers

PMID38436428
PMCPMC11282576
OpenAlexW4392379347

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.