Evidence map›Paper›PMID 38436085›Full record

ArticleDisease models & mechanisms2024

Functional and in silico analysis of ATP8A2 and other P4-ATPase variants associated with human genetic diseases.

Eli Matsell, Jens Peter Andersen, Robert S Molday

Open access · goldAbstract read
In one paragraph

Article in Disease models & mechanisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  7. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  8. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  9. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  10. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  11. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  12. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  13. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  14. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  15. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  16. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  17. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  18. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  19. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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  20. Translating multiscale research in rare disease.Disease models & mechanisms · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Eli MatsellDepartment of Biochemistry & Molecular Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.ORCID 0009-0007-8247-6289
Jens Peter AndersenDepartment of Biomedicine, Aarhus University, 8000 Aarhus, Denmark.ORCID 0000-0003-0654-4300
Robert S MoldayDepartment of Biochemistry & Molecular Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.ORCID 0000-0002-4479-1831
University of British Columbia · CAAarhus University · DK

Funding

CIHR PJT 148649
6 · The paper itself

Abstract

P4-ATPases flip lipids from the exoplasmic to cytoplasmic leaflet of cell membranes, a property crucial for many biological processes. Mutations in P4-ATPases are associated with severe inherited and complex human disorders. We determined the expression, localization and ATPase activity of four variants of ATP8A2, the P4-ATPase associated with the neurodevelopmental disorder known as cerebellar ataxia, impaired intellectual development and disequilibrium syndrome 4 (CAMRQ4). Two variants, G447R and A772P, harboring mutations in catalytic domains, expressed at low levels and mislocalized in cells. In contrast, the E459Q variant in a flexible loop displayed wild-type expression levels, Golgi-endosome localization and ATPase activity. The R1147W variant expressed at 50% of wild-type levels but showed normal localization and activity. These results indicate that the G447R and A772P mutations cause CAMRQ4 through protein misfolding. The E459Q mutation is unlikely to be causative, whereas the R1147W may display a milder disease phenotype. Using various programs that predict protein stability, we show that there is a good correlation between the experimental expression of the variants and in silico stability assessments, suggesting that such analysis is useful in identifying protein misfolding disease-associated variants.

Indexed as

Adenosine TriphosphatasesComputer SimulationGenetic Diseases, InbornMutationPhospholipid Transfer ProteinsCerebellar AtaxiaGolgi ApparatusHEK293 CellsHumansIntellectual DisabilityProtein StabilityProtein TransportAdenosine TriphosphatasesATP8A2 protein, humanPhospholipid Transfer ProteinsDisease mechanismsIn silico protein stabilityMissense mutationsNeurodevelopmental diseaseP4-ATPasesProtein misfolding

Identifiers

PMID38436085
PMCPMC11073571
OpenAlexW4392374292

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.