Evidence map›Paper›PMID 38435825›Full record

ArticleBioengineering & translational medicine2024

An AI-assisted integrated, scalable, single-cell phenomic-transcriptomic platform to elucidate intratumor heterogeneity against immune response.

Christopher P Tostado, Lucas Xian Da Ong, Joel Jia Wei Heng, Carlo Miccolis, Shumei Chia, Justine Jia Wen Seow, Yi-Chin Toh, Ramanuj DasGupta

Abstract read
In one paragraph

Article in Bioengineering & translational medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Antibody-drug conjugate engineering: from design to efficacy and safety.Signal transduction and targeted therapy · 2026
    Review
  3. Leveraging Microphysiological Systems to Facilitate Neutrophil-Based Cancer Immunotherapy.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Christopher P TostadoGenome Institute of Singapore, Laboratory of Precision Oncology and Cancer Evolution Singapore Singapore.ORCID https://orcid.org/0000-0002-9312-6897
Lucas Xian Da OngInstitute for Health Innovation and Technology (iHealthtech), National University of Singapore Singapore Singapore.
Joel Jia Wei HengGenome Institute of Singapore, Laboratory of Precision Oncology and Cancer Evolution Singapore Singapore.ORCID https://orcid.org/0000-0002-8853-9355
Carlo MiccolisGenome Institute of Singapore, Laboratory of Precision Oncology and Cancer Evolution Singapore Singapore.
Shumei ChiaGenome Institute of Singapore, Laboratory of Precision Oncology and Cancer Evolution Singapore Singapore.
Justine Jia Wen SeowGenome Institute of Singapore, Laboratory of Precision Oncology and Cancer Evolution Singapore Singapore.
Yi-Chin TohInstitute for Health Innovation and Technology (iHealthtech), National University of Singapore Singapore Singapore.
Ramanuj DasGuptaGenome Institute of Singapore, Laboratory of Precision Oncology and Cancer Evolution Singapore Singapore.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a novel framework combining single-cell phenotypic data with single-cell transcriptomic analysis to identify factors underpinning heterogeneity in antitumor immune response. We developed a pairwise, tumor-immune discretized interaction assay between natural killer (NK-92MI) cells and patient-derived head and neck squamous cell carcinoma (HNSCC) cell lines on a microfluidic cell-trapping platform. Furthermore we generated a deep-learning computer vision algorithm that is capable of automating the acquisition and analysis of a large, live-cell imaging data set (>1 million) of paired tumor-immune interactions spanning a time course of 24 h across multiple HNSCC lines (

Indexed as

computer visionhead and neck cancerimmunotherapymicrofluidicsprecision oncologysingle‐cell transcriptomics

Identifiers

PMID38435825
PMCPMC10905538

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.