Evidence map›Paper›PMID 38434803›Full record

ArticleACS omega2024

A Comparison of Bottom-Up Proteomic Sample Preparation Methods for the Human Parasite

Anna-Lena Mayr, Karin Hummel, David Leitsch, Ebrahim Razzazi-Fazeli

Open access · goldAbstract read
In one paragraph

Article in ACS omega, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Bark beetle (Frontiers in plant science · 2026
    Article
  2. Article
  3. Article
  4. The proteomic landscape ofFrontiers in cellular and infection microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Anna-Lena MayrVetCore Facility, University of Veterinary Medicine, Veterinärplatz 1, 1210 Vienna, Austria.ORCID https://orcid.org/0009-0007-8462-2091
Karin HummelVetCore Facility, University of Veterinary Medicine, Veterinärplatz 1, 1210 Vienna, Austria.
David LeitschISPTM, Medical University of Vienna, Kinderspitalgasse 15, 1090 Vienna, Austria.
Ebrahim Razzazi-FazeliVetCore Facility, University of Veterinary Medicine, Veterinärplatz 1, 1210 Vienna, Austria.
University of Veterinary Medicine Vienna · ATMedical University of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bottom-up proteomic approaches depend on the efficient digestion of proteins into peptides for mass spectrometric analysis. Sample preparation strategies, based on magnetic beads, filter-aided systems, or in-solution digests, are commonly used for proteomic analysis. Time-intensive methods like filter-aided sample preparation (FASP) have led to the development of new, more time-efficient filter-based strategies like suspension trappings (S-Traps) or magnetic bead-based strategies like SP3. S-Traps have been reported as an alternative proteomic sample preparation method as they allow for high sodium dodecyl sulfate (SDS) concentrations to be present in the sample. In this study, we compare the efficiency of different protocols for FASP, SP3, and S-Trap-based digestion of proteins after extraction from

Identifiers

PMID38434803
PMCPMC10905575
OpenAlexW4391778050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.