Evidence map›Paper›PMID 38429691›Full record

ArticleMicrobial cell factories2024

Engineering Escherichia coli for increased Und-P availability leads to material improvements in glycan expression technology.

Emily J Kay, Manoj K Dooda, Joseph C Bryant, Amanda J Reid, Brendan W Wren, Jerry M Troutman, Matthew A Jorgenson

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Stepwise Assembly of theBiochemistry · 2026
    Article
  2. Review
  3. Review
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  5. Review
  6. Characterization of Ssc, anJournal of bacteriology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Emily J KayDepartment of Infection Biology, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK.
Manoj K DoodaDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA.
Joseph C BryantDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences, 4301 West Markham St. / Biomed I, Room 511 / Little Rock, Little Rock, AR, 72205, USA.
Amanda J ReidNanoscale Science Program, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA.
Brendan W WrenDepartment of Infection Biology, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK.
Jerry M TroutmanNanoscale Science Program, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA.
Matthew A JorgensonDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences, 4301 West Markham St. / Biomed I, Room 511 / Little Rock, Little Rock, AR, 72205, USA. majorgenson@uams.edu.
University of North Carolina at Charlotte · USLondon School of Hygiene & Tropical Medicine · GBUniversity of Arkansas for Medical Sciences · US

Funding

Glycan Expression Analysis using an Odyssey CLx Infrared Imaging SystemR01GM061019 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI VOTH, DANIEL E · 2000 to 2021
$8.0M
In vitro and Cellular Tools for Complex Polysaccharide BiosynthesisR01GM123251 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI TROUTMAN, JERRY M · 2017 to 2023
$2.1M
Probing the Glycan Biosynthetic Machinery of Campylobacter Jejuni.F32GM080794 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI TROUTMAN, JERRY M · 2008 to 2009
$101k
Biotechnology and Biological Sciences Research Council BB/R008124/1Biotechnology and Biological Sciences Research Council E20372NIGMS NIH HHS F32 GM080794NIGMS NIH HHS GM061019NIGMS NIH HHS GM123251NIGMS NIH HHS R01 GM061019NIGMS NIH HHS R01 GM123251Wellcome Trust 102979/Z/13/Z
6 · The paper itself

Abstract

backgroundBacterial surface glycans are assembled by glycosyltransferases (GTs) that transfer sugar monomers to long-chained lipid carriers. Most bacteria employ the 55-carbon chain undecaprenyl phosphate (Und-P) to scaffold glycan assembly. The amount of Und-P available for glycan synthesis is thought to be limited by the rate of Und-P synthesis and by competition for Und-P between phosphoglycosyl transferases (PGTs) and GTs that prime glycan assembly (which we collectively refer to as PGT/GTs). While decreasing Und-P availability disrupts glycan synthesis and promotes cell death, less is known about the effects of increased Und-P availability.

resultsTo determine if cells can maintain higher Und-P levels, we first reduced intracellular competition for Und-P by deleting all known non-essential PGT/GTs in the Gram-negative bacterium Escherichia coli (hereafter called ΔPGT/GT cells). We then increased the rate of Und-P synthesis in ΔPGT/GT cells by overexpressing the Und-P(P) synthase uppS from a plasmid (puppS). Und-P quantitation revealed that ΔPGT/GT/puppS cells can be induced to maintain 3-fold more Und-P than wild type cells. Next, we determined how increasing Und-P availability affects glycan expression. Interestingly, increasing Und-P availability increased endogenous and recombinant glycan expression. In particular, ΔPGT/GT/puppS cells could be induced to express 7-fold more capsule from Streptococcus pneumoniae serotype 4 than traditional E. coli cells used to express recombinant glycans.

conclusionsWe demonstrate that the biotechnology standard bacterium E. coli can be engineered to maintain higher levels of Und-P. The results also strongly suggest that Und-P pathways can be engineered to increase the expression of potentially any Und-P-dependent polymer. Given that many bacterial glycans are central to the production of vaccines, diagnostics, and therapeutics, increasing Und-P availability should be a foremost consideration when designing bacterial glycan expression systems.

Indexed as

Escherichia coliPolyisoprenyl PhosphatesBiotechnologyPolysaccharidesPolyisoprenyl PhosphatesPolysaccharidesundecaprenyl phosphateCapsuleGlycoengineeringPolysaccharideUndecaprenyl phosphate

Identifiers

PMID38429691
PMCPMC10908060
OpenAlexW4392388457

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.