Evidence map›Paper›PMID 38429495›Full record

ArticleNature genetics2024

Digenic inheritance involving a muscle-specific protein kinase and the giant titin protein causes a skeletal muscle myopathy.

Ana Töpf, Dan Cox, Irina T Zaharieva, Valeria Di Leo, Jaakko Sarparanta, Per Harald Jonson, Ian M Sealy, Andrei Smolnikov, Richard J White, Anna Vihola and 75 more

Open access · hybridAbstract read
In one paragraph

Article in Nature genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

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  14. Congenital Titinopathies Linked to Mutations inInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

85 authors at 20 institutions in 13 countries.

Ana TöpfJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK. ana.topf@ncl.ac.uk.ORCID http://orcid.org/0000-0002-9227-2526
Dan CoxJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-5405-6267
Irina T ZaharievaDubowitz Neuromuscular Centre, UCL Great Ormond Street Institute of Child Health & Great Ormond Street Hospital, London, UK.
Valeria Di LeoJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Jaakko SarparantaFolkhälsan Research Center, Helsinki, Finland.ORCID http://orcid.org/0000-0002-5497-5255
Per Harald JonsonFolkhälsan Research Center, Helsinki, Finland.ORCID http://orcid.org/0000-0003-2423-359X
Ian M SealySchool of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0002-2890-6635
Andrei SmolnikovSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, New South Wales, Australia.
Richard J WhiteSchool of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0003-1842-412X
Anna ViholaFolkhälsan Research Center, Helsinki, Finland.
Marco SavareseFolkhälsan Research Center, Helsinki, Finland.
Munise MerterogluSchool of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0002-9747-2981
Neha WaliWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Kristen M LaricchiaProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Cristina VenturiniDivision of Infection and Immunity, University College London, London, UK.
Bas VrolingBio-Prodict, Nijmegen, The Netherlands.
Sarah L StentonProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-4071-449X
Beryl B CummingsLaboratory of Angiogenesis and Cancer Metabolism, Department of Biology, University of Padua, Padua, Italy.
Elizabeth HarrisJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-4489-3977
Chiara Marini-BettoloJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Jordi Diaz-ManeraJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Matt HendersonMuscle Immunoanalysis Unit, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Rita BarresiIRCCS San Camillo Hospital, Venice, Italy.
Jennifer DuffJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Eleina M EnglandProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Jane PatrickWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Sundos Al-HusayniThe Manton Center for Orphan Disease Research, Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Valerie BiancalanaInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Inserm U1258, Cnrs UMR7104, Université de Strasbourg, Illkirch, France.
Alan H BeggsThe Manton Center for Orphan Disease Research, Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-8818-0568
Istvan BodiDepartment of Clinical Neuropathology, King's College Hospital NHS Foundation Trust, London, UK.
Shobhana BommireddipalliKids Neuroscience Centre, the Children's Hospital at Westmead, the University of Sydney and the Children's Medical Research Institute, Westmead, New South Wales, Australia.
Carsten G BönnemannNeuromuscular and Neurogenetic Disorders of Childhood Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-5930-2324
Anita CairnsNeurosciences Department, Queensland Children's Hospital, Brisbane, Queensland, Australia.
Mei-Ting ChiewDepartment of Diagnostic Genomics, PathWest Laboratory Medicine, Perth, Western Australia, Australia.
Kristl G ClaeysDepartment of Neurology, University Hospitals Leuven, Leuven, Belgium.
Sandra T CooperKids Neuroscience Centre, the Children's Hospital at Westmead, the University of Sydney and the Children's Medical Research Institute, Westmead, New South Wales, Australia.ORCID http://orcid.org/0000-0002-7314-5097
Mark R DavisDepartment of Diagnostic Genomics, PathWest Laboratory Medicine, Perth, Western Australia, Australia.
Sandra DonkervoortNeuromuscular and Neurogenetic Disorders of Childhood Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.
Corrie E ErasmusDepartment of Paediatric Neurology, Donders Institute for Brain, Cognition and Behavior, Radboud University Medical Centre, Amalia Children's Hospital, Nijmegen, The Netherlands.
Mahmoud R FassadWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Casie A GenettiThe Manton Center for Orphan Disease Research, Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Carla GrosmannDepartment of Neurology, Rady Children's Hospital University of California San Diego, San Diego, CA, USA.
Heinz JungbluthDepartment of Paediatric Neurology, Neuromuscular Service, Evelina's Children Hospital, Guy's & St. Thomas' Hospital NHS Foundation Trust, London, UK.
Erik-Jan KamsteegDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0001-6480-1892
Xavière LornageInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Inserm U1258, Cnrs UMR7104, Université de Strasbourg, Illkirch, France.
Wolfgang N LöscherDepartment of Neurology, Medical University Innsbruck, Innsbruck, Austria.
Edoardo MalfattiAPHP, Neuromuscular Reference Center Nord-Est-Ile-de-France, Henri Mondor Hospital, Université Paris Est, U955, INSERM, Creteil, France.
Adnan ManzurDubowitz Neuromuscular Centre, UCL Great Ormond Street Institute of Child Health & Great Ormond Street Hospital, London, UK.
Pilar MartíCentro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Madrid, Spain.ORCID http://orcid.org/0000-0002-1022-9314
Tiziana E MonginiDepartment of Neurosciences Rita Levi Montalcini, Università degli Studi di Torino, Torino, Italy.
Nuria MuelasCentro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Madrid, Spain.
Atsuko NishikawaDepartment of Neuromuscular Research, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo, Japan.
Anne O'Donnell-LuriaProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-6418-9592
Narumi OgonukiRIKEN BioResource Research Center, Tsukuba, Japan.
Gina L O'GradyStarship Children's Health, Auckland District Health Board, Auckland, New Zealand.
Emily O'HeirProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-7669-8239
Stéphanie PaquayCliniques Universitaires St-Luc, Centre de Référence Neuromusculaire, Université de Louvain, Brussels, Belgium.
Rahul PhadkeDubowitz Neuromuscular Centre, UCL Great Ormond Street Institute of Child Health & Great Ormond Street Hospital, London, UK.
Beth A PletcherDivision of Clinical Genetics, Department of Pediatrics, Rutgers New Jersey Medical School, Newark, NJ, USA.
Norma B RomeroNeuromuscular Morphology Unit, Myology Institute, Sorbonne Université, Centre de Référence de Pathologie Neuromusculaire Nord/Est/Ile-de-France (APHP), GH Pitié-Salpêtrière, Paris, France.
Meyke SchoutenDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.
Snehal ShahDepartment of Neurology, Perth Children's Hospital, Nedlands, Western Australia, Australia.
Izelle SmutsDepartment of Paediatrics, Steve Biko Academic Hospital, University of Pretoria, Pretoria, South Africa.
Yves SznajerCenter for Human Genetic, Cliniques Universitaires Saint Luc, UCLouvain, Brussels, Belgium.ORCID http://orcid.org/0000-0001-8161-4490
Giorgio TascaJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0003-0849-9144
Robert W TaylorWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-7768-8873
Allysa TuiteDivision of Clinical Genetics, Department of Pediatrics, Rutgers New Jersey Medical School, Newark, NJ, USA.ORCID http://orcid.org/0000-0001-7703-3378
Peter Van den BerghCliniques Universitaires St-Luc, Centre de Référence Neuromusculaire, Université de Louvain, Brussels, Belgium.
Grace VanNoyProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Nicol C VoermansDepartment of Neurology, Donders Institute for Brain, Cognition and Behavior, Radboud University Medical Centre, Nijmegen, The Netherlands.
Julia V WanschitzDepartment of Neurology, Medical University Innsbruck, Innsbruck, Austria.
Elizabeth WraigeEvelina's Children Hospital, Guy's & St. Thomas' Hospital NHS Foundation Trust, London, UK.
Kimihiko YoshimuraDepartment Neurology, Nankoku Hospital, Kochi, Japan.
Emily C OatesSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, New South Wales, Australia.
Osamu NakagawaDepartment of Molecular Physiology, National Cerebral and Cardiovascular Center Research Institute, Osaka, Japan.
Ichizo NishinoDepartment of Neuromuscular Research, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo, Japan.ORCID http://orcid.org/0000-0001-9452-112X
Jocelyn LaporteInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Inserm U1258, Cnrs UMR7104, Université de Strasbourg, Illkirch, France.ORCID http://orcid.org/0000-0001-8256-5862
Juan J VilchezCentro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Madrid, Spain.ORCID http://orcid.org/0000-0002-0532-2872
Daniel G MacArthurProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Anna SarkozyDubowitz Neuromuscular Centre, UCL Great Ormond Street Institute of Child Health & Great Ormond Street Hospital, London, UK.
Heather J CordellPopulation Health Sciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-1879-5572
Bjarne UddFolkhälsan Research Center, Helsinki, Finland.
Elisabeth M Busch-NentwichSchool of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.
Francesco MuntoniDubowitz Neuromuscular Centre, UCL Great Ormond Street Institute of Child Health & Great Ormond Street Hospital, London, UK.
Volker StraubJohn Walton Muscular Dystrophy Research Centre, Translational and Clinical Research Institute, Newcastle University and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK. volker.straub@ncl.ac.uk.ORCID http://orcid.org/0000-0001-9046-3540
Broad Institute · USNewcastle University · GBGreat Ormond Street Hospital · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GBUniversity of Helsinki · FIBoston Children's Hospital · USInserm · FRRadboud University Nijmegen · NLCliniques Universitaires Saint-Luc · BEQueen Mary University of London · GBCentre for Biomedical Network Research on Rare Diseases · ESChildren's Medical Research Institute · AUInnsbruck Medical University · ATNational Center of Neurology and Psychiatry · JPNational Institutes of Health · USPathwest Laboratory Medicine · AURutgers, The State University of New Jersey · USSt Thomas' Hospital · GBUniversity of Padua · ITUNSW Sydney · AU

Funding

Molecular and Clinical Manifestations of Matrix and Aggregate MyopathiesZIANS003129 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI BÖNNEMANN, CARSTEN · 2011 to 2025
$52.8M
Joint Center for Mendelian GenomicsUM1HG008900 · NHGRI · BROAD INSTITUTE, INC. · PI O'DONNELL-LURIA, ANNE, REHM, HEIDI L · 2016 to 2020
$16.5M
Broad Institute Mendelian Genomic Research CenterU01HG011755 · NHGRI · BROAD INSTITUTE, INC. · PI Anne O'Donnell-Luria, MICHAEL E TALKOWSKI · 2021 to 2026
$14.6M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI POMEROY, SCOTT LOREN · 2016 to 2020
$5.2M
A powerful web-based discovery platform for rare disease geneticsR01HG009141 · NHGRI · BROAD INSTITUTE, INC. · PI QUINLAN, AARON R, REHM, HEIDI L · 2017 to 2020
$2.9M
Medical Research Council G0800674Medical Research Council MR/S005021/1Medical Research Council MR/W019027/1NHGRI NIH HHS R01 HG009141NHGRI NIH HHS U01 HG011755NHGRI NIH HHS UM1 HG008900NICHD NIH HHS U54 HD090255Wellcome Trust
6 · The paper itself

Abstract

In digenic inheritance, pathogenic variants in two genes must be inherited together to cause disease. Only very few examples of digenic inheritance have been described in the neuromuscular disease field. Here we show that predicted deleterious variants in SRPK3, encoding the X-linked serine/argenine protein kinase 3, lead to a progressive early onset skeletal muscle myopathy only when in combination with heterozygous variants in the TTN gene. The co-occurrence of predicted deleterious SRPK3/TTN variants was not seen among 76,702 healthy male individuals, and statistical modeling strongly supported digenic inheritance as the best-fitting model. Furthermore, double-mutant zebrafish (srpk3

Indexed as

Muscular DiseasesZebrafishAnimalsConnectinHumansMaleMuscle, SkeletalMutationConnectinTTN protein, human

Identifiers

PMID38429495
PMCPMC10937387
OpenAlexW4392356166

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.