Evidence map›Paper›PMID 38429383›Full record

ArticleCommunications biology2024

Unraveling the transcriptomic landscape of eye migration and visual adaptations during flatfish metamorphosis.

Laura Guerrero-Peña, Paula Suarez-Bregua, Lucía Sánchez-Ruiloba, Luis Méndez-Martínez, Pablo García-Fernández, Ricardo Tur, Juan J Tena, Josep Rotllant

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Laura Guerrero-PeñaAquatic Biotechnology Lab., Institute of Marine Research, Spanish National Research Council (IIM-CSIC), 36208, Vigo, Spain.ORCID 0000-0003-2237-3580
Paula Suarez-BreguaAquatic Biotechnology Lab., Institute of Marine Research, Spanish National Research Council (IIM-CSIC), 36208, Vigo, Spain.
Lucía Sánchez-RuilobaInstitute of Marine Research, Spanish National Research Council (IIM-CSIC), 36208, Vigo, Spain.
Luis Méndez-MartínezAquatic Biotechnology Lab., Institute of Marine Research, Spanish National Research Council (IIM-CSIC), 36208, Vigo, Spain.
Pablo García-FernándezNueva Pescanova Biomarine Center, S.L., 36980, O Grove, Spain.
Ricardo TurNueva Pescanova Biomarine Center, S.L., 36980, O Grove, Spain.
Juan J TenaCentro Andaluz de Biología del Desarrollo (CABD), CSIC-Universidad Pablo de Olavide, 41013, Sevilla, Spain.ORCID 0000-0001-8165-7984
Josep RotllantAquatic Biotechnology Lab., Institute of Marine Research, Spanish National Research Council (IIM-CSIC), 36208, Vigo, Spain. rotllant@iim.csic.es.ORCID 0000-0001-5331-807X
Consejo Superior de Investigaciones Científicas · ESCentro Andaluz de Biología del Desarrollo · ES

Funding

Ministry of Economy and Competitiveness | Agencia Estatal de Investigación (Spanish Agencia Estatal de Investigación) AGL2017-89648PMinistry of Economy and Competitiveness | Agencia Estatal de Investigación (Spanish Agencia Estatal de Investigación) PRE2018-085475
6 · The paper itself

Abstract

Flatfish undergo a remarkable metamorphosis from symmetrical pelagic larvae to fully asymmetrical benthic juveniles. The most distinctive features of this transformation is the migration of one eye. The molecular role of thyroid hormone in the metamorphosis process in flatfishes is well established. However, the regulatory network that facilitates eye movement remains enigmatic. This paper presents a morphological investigation of the metamorphic process in turbot eyes, using advanced imaging techniques and a global view of gene expression. The study covers migrant and non-migrant eyes and aims to identify the genes that are active during ocular migration. Our transcriptomic analysis shows a significant up-regulation of immune-related genes. The analysis of eye-specific genes reveals distinct patterns during the metamorphic process. Myosin is highlighted in the non-migrant eye, while ependymin is highlighted in the migrant eye, possibly involved in optic nerve regeneration. Furthermore, a potential association between the alx3 gene and cranial restructuring has been identified. Additionally, it confirmed simultaneous adaptation to low light in both eyes, as described by changes in opsins expression during the metamorphic process. The study also revealed that ocular migration activates systems asynchronously in both eyes, providing insight into multifaceted reorganization processes during metamorphosis of flatfish.

Indexed as

FlatfishesAnimalsEyeGene Expression ProfilingMetamorphosis, BiologicalThyroid HormonesThyroid Hormones

Identifiers

PMID38429383
PMCPMC10907633
OpenAlexW4392387201

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.