Evidence map›Paper›PMID 38428993›Full record

ArticleThe Journal of infectious diseases2024

Diagnosing Polyomavirus Nephropathy Without a Biopsy: Validation of the Urinary Polyomavirus-Haufen Test in a Proof-of-Concept Study Including Uromodulin Knockout Mice.

Volker Nickeleit, Dalton Butcher, Bawana D Thompson, Lauraine H Rivier, Harsharan K Singh

Open access · hybridAbstract readValidation Study
In one paragraph

Article in The Journal of infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Volker NickeleitDepartment of Pathology and Laboratory Medicine, Division of Nephropathology, University of North Carolina School of Medicine at Chapel Hill, Chapel Hill, North Carolina, USA.
Dalton ButcherDepartment of Pathology and Laboratory Medicine, Division of Nephropathology, University of North Carolina School of Medicine at Chapel Hill, Chapel Hill, North Carolina, USA.
Bawana D ThompsonDepartment of Pathology and Laboratory Medicine, Division of Nephropathology, University of North Carolina School of Medicine at Chapel Hill, Chapel Hill, North Carolina, USA.
Lauraine H RivierDepartment of Pathology and Laboratory Medicine, Division of Nephropathology, University of North Carolina School of Medicine at Chapel Hill, Chapel Hill, North Carolina, USA.
Harsharan K SinghDepartment of Pathology and Laboratory Medicine, Division of Nephropathology, University of North Carolina School of Medicine at Chapel Hill, Chapel Hill, North Carolina, USA.
University of North Carolina at Chapel Hill · US

Funding

Department of Pathology and Laboratory MedicineDivision of NephropathologyUniversity of North Carolina
6 · The paper itself

Abstract

backgroundPolyomavirus (PyV) nephropathy (PyVN) leads to kidney transplant dysfunction and loss. Since a definitive diagnosis requires an invasive kidney biopsy, a timely diagnosis is often hampered. In this clinical dilemma the PyV haufen-test, centering around the detection of 3-dimensional PyV aggregates in the urine, might provide crucial diagnostic information.

methodsA multistep experimental design was used. The hypothesis was that PyV-haufen form within the kidneys under high concentrations of uromodulin, a kidney-specific protein and that PyV-haufen are, therefore, kidney-specific disease biomarkers.

resultsThe first investigative step showed colocalization of uromodulin with aggregated PyV (1) in 10 kidneys with PyVN by immunohistochemistry, (2) in urine samples containing PyV-haufen by electron microscopy/immunogold labeling (n = 3), and (3) in urine samples containing PyV-haufen by immunoprecipitation assays (n = 4). In the in vitro experiments of the next step, only high uromodulin concentrations (≥1.25 mg/mL) aggregated PyV, as is expected to occur within injured nephrons. In contrast, in voided urine samples (n = 59) uromodulin concentrations were below aggregation concentrations (1.2-19.6 µg/mL). In the third investigative step, none of 11 uromodulin-/- knockout mice (0%) with histologic signs of PyVN showed urinary PyV-haufen shedding, compared with 10 of 14 uromodulin+/+ wild-type mice (71%).

conclusionsPyV-haufen form within kidneys under high uromodulin concentrations. Thus, PyV-haufen detected in the urine are specific biomarkers for intrarenal disease (ie, definitive PyVN).

Indexed as

Kidney DiseasesMice, KnockoutPolyomavirusPolyomavirus InfectionsUromodulinAdultAgedAnimalsBiomarkersBiopsyFemaleHumansKidneyMaleMiceMiddle AgedBiomarkersUromodulinbiomarkerBK polyomavirushaufen-testtransplantationurine

Identifiers

PMID38428993
PMCPMC11566231
OpenAlexW4392344577

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.