Evidence map›Paper›PMID 38424101›Full record

ArticleScientific reports2024

Transcriptomics of temperature-sensitive R gene-mediated resistance identifies a WAKL10 protein interaction network.

Katherine Noel, Ivan R Wolf, David Hughes, Guilherme T Valente, Aiming Qi, Yong-Ju Huang, Bruce D L Fitt, Henrik U Stotz

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Frontiers in microbiology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Katherine Noel *Centre for Agriculture, Food and Environmental Management, University of Hertfordshire, Hatfield, AL10 9AB, UK. knoel@lspb.eu.
Ivan R Wolf *Department of Biological Sciences, University of North Carolina, Charlotte, NC, 28223, USA.
David HughesIntelligent Data Ecosystems, Rothamsted Research, Harpenden, AL5 2JQ, UK.
Guilherme T ValenteSchool of Medicine, São Paulo State University - UNESP, Botocatu, SP, 18618687, Brazil.
Aiming QiCentre for Agriculture, Food and Environmental Management, University of Hertfordshire, Hatfield, AL10 9AB, UK.
Yong-Ju HuangCentre for Agriculture, Food and Environmental Management, University of Hertfordshire, Hatfield, AL10 9AB, UK.
Bruce D L FittCentre for Agriculture, Food and Environmental Management, University of Hertfordshire, Hatfield, AL10 9AB, UK.
Henrik U StotzCentre for Agriculture, Food and Environmental Management, University of Hertfordshire, Hatfield, AL10 9AB, UK. h.stotz@herts.ac.uk.
University of Hertfordshire · GBRothamsted Research · GBUniversidade Estadual Paulista (Unesp) · BRUniversity of North Carolina at Charlotte · US

Funding

Biotechnology and Biological Sciences Research Council BB/N503848/1Biotechnology and Biological Sciences Research Council P00489X/1
6 · The paper itself

Abstract

Understanding temperature-sensitivity of R gene-mediated resistance against apoplastic pathogens is important for sustainable food production in the face of global warming. Here, we show that resistance of Brassica napus cotyledons against Leptosphaeria maculans was temperature-sensitive in introgression line Topas-Rlm7 but temperature-resilient in Topas-Rlm4. A set of 1,646 host genes was differentially expressed in Topas-Rlm4 and Topas-Rlm7 in response to temperature. Amongst these were three WAKL10 genes, including BnaA07g20220D, representing the temperature-sensitive Rlm7-1 allele and Rlm4. Network analysis identified a WAKL10 protein interaction cluster specifically for Topas-Rlm7 at 25 °C. Diffusion analysis of the Topas-Rlm4 network identified WRKY22 as a putative regulatory target of the ESCRT-III complex-associated protein VPS60.1, which belongs to the WAKL10 protein interaction community. Combined enrichment analysis of gene ontology terms considering gene expression and network data linked vesicle-mediated transport to defence. Thus, dysregulation of effector-triggered defence in Topas-Rlm7 disrupts vesicle-associated resistance against the apoplastic pathogen L. maculans.

Indexed as

Brassica napusProtein Interaction MapsGene Expression ProfilingGenes, vprPlant DiseasesProteinsTemperatureProteins

Identifiers

PMID38424101
PMCPMC10904819
OpenAlexW4392297702

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.