Evidence map›Paper›PMID 38422126›Full record

ArticleScience (New York, N.Y.)2024

Native architecture of a human GBP1 defense complex for cell-autonomous immunity to infection.

Shiwei Zhu, Clinton J Bradfield, Agnieszka Maminska, Eui-Soon Park, Bae-Hoon Kim, Pradeep Kumar, Shuai Huang, Minjeong Kim, Yongdeng Zhang, Joerg Bewersdorf and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 42 citations in OpenAlex.

  1. The gasdermin family: from pyroptosis mechanisms to therapeutic targets.Signal transduction and targeted therapy · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. CMPK2 restrictsbioRxiv : the preprint server for biology · 2026
    Article
  8. Apolipoproteins L involvement in immunity.Journal of human immunity · 2026
    Review
  9. Article
  10. Stromal Cell-Mast Cell Communication Orchestrates Anti-Viral Immunity in the Meninges.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Review
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shiwei Zhu *Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0003-1145-1192
Clinton J Bradfield *Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0001-6410-3517
Agnieszka Maminska *Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-1300-8242
Eui-Soon Park *Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-1375-8027
Bae-Hoon Kim *Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0001-6866-7248
Pradeep KumarHoward Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.
Shuai HuangHoward Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-8903-122X
Minjeong KimHoward Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.
Yongdeng ZhangDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-4569-8137
Joerg BewersdorfDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-4085-7020
John D MacMickingHoward Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-1734-135X
Howard Hughes Medical Institute · USYale University · US

Funding

Yale Diabetes Research CenterP30DK045735 · NIDDK · YALE UNIVERSITY · PI Kevan C Herold, GERALD I SHULMAN · 1993 to 2026
$44.0M
Immune control of tuberculosis by IFN-gamma-inducible LRG-47R01AI068041 · NIAID · YALE UNIVERSITY · PI MACMICKING, JOHN DAVID · 2006 to 2021
$5.9M
GBPs in inflammasome activation and host defense to infectionR01AI108834 · NIAID · YALE UNIVERSITY · PI John David MacMicking · 2014 to 2026
$5.0M
Enabling Nanoscale Dynamic Imaging of Vesicles and OrganellesR01GM118486 · NIGMS · YALE UNIVERSITY · PI BADDELEY, DAVID, BEWERSDORF, JOERG · 2016 to 2019
$3.4M
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI068041NIAID NIH HHS R01 AI108834NIDDK NIH HHS P30 DK045735NIGMS NIH HHS R01 GM118486Wellcome Trust
6 · The paper itself

Abstract

All living organisms deploy cell-autonomous defenses to combat infection. In plants and animals, large supramolecular complexes often activate immune proteins for protection. In this work, we resolved the native structure of a massive host-defense complex that polymerizes 30,000 guanylate-binding proteins (GBPs) over the surface of gram-negative bacteria inside human cells. Construction of this giant nanomachine took several minutes and remained stable for hours, required guanosine triphosphate hydrolysis, and recruited four GBPs plus caspase-4 and Gasdermin D as a cytokine and cell death immune signaling platform. Cryo-electron tomography suggests that GBP1 can adopt an extended conformation for bacterial membrane insertion to establish this platform, triggering lipopolysaccharide release that activated coassembled caspase-4. Our "open conformer" model provides a dynamic view into how the human GBP1 defense complex mobilizes innate immunity to infection.

Indexed as

BacteriaBacterial InfectionsCell MembraneGTP-Binding ProteinsInnate Immunity RecognitionCaspases, InitiatorCryoelectron MicroscopyCytokinesElectron Microscope TomographyGasderminsGuanosine TriphosphateHumansHydrolysisImmunity, CellularPhosphate-Binding ProteinsProtein ConformationCASP4 protein, humanCaspases, InitiatorCytokinesGasderminsGBP1 protein, humanGSDMD protein, humanGTP-Binding ProteinsGuanosine TriphosphatePhosphate-Binding Proteins

Identifiers

PMID38422126
PMCPMC12091997
OpenAlexW4392283003

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.