Evidence map›Paper›PMID 38422072›Full record

ArticlePloS one2024

Rapid and specific detection of wheat spindle streak mosaic virus using RT-LAMP in durum wheat crude leaf extract.

Monica Marra, Paolo Mussano, Eugenio Pinton, Cinzia Montemurro, Elena Baldoni, Claudio Ratti, Slavica Matić, Chiara D'Errico, Gian Paolo Accotto

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Monica MarraInstitute for Sustainable Plant Protection, National Research Council, Turin, Italy.
Paolo MussanoInstitute for Sustainable Plant Protection, National Research Council, Turin, Italy.
Eugenio PintonInstitute for Sustainable Plant Protection, National Research Council, Turin, Italy.
Cinzia MontemurroDepartment of Soil, Plant and Food Science, University of Bari Aldo Moro, Bari, Italy.
Elena BaldoniInstitute of Agricultural Biology and Biotechnology, National Research Council, Milan, Italy.
Claudio RattiDepartment of Agricultural and Food Sciences, University of Bologna, Bologna, Italy.
Slavica MatićInstitute for Sustainable Plant Protection, National Research Council, Turin, Italy.
Chiara D'ErricoInstitute for Sustainable Plant Protection, National Research Council, Turin, Italy.ORCID 0000-0003-0546-9900
Gian Paolo AccottoInstitute for Sustainable Plant Protection, National Research Council, Turin, Italy.ORCID 0000-0002-3825-1097

Funding

EUROPEAN HORIZON 871029
6 · The paper itself

Abstract

To accurately determine the spread of any pathogen, including plant viruses, a quick, sensitive, cost-effective, point-of-care diagnostic assay is necessary. Wheat spindle streak mosaic virus (WSSMV) is a Bymovirus, transmitted by the plasmodiophorid Polymyxa graminis Led, which causes yellow mosaic and reduces the grain yield in wheat. Currently, detection protocols for WSSMV use ELISA or more sensitive PCR-based approaches requiring specialized laboratory and personnel. A protocol for reverse transcription loop mediated isothermal amplification (RT-LAMP) has been developed and optimized for the rapid detection of viruses using crude extracts from wheat leaves. The protocol was specific for WSSMV detection, while no reaction was observed with SBCMV or SBWMV, the non-target viruses transmitted by the same vector. The RT-LAMP assay was shown to be as sensitive as the one-step WSSMV specific RT-PCR. The RT-LAMP assay can be performed under field conditions using a portable instrument, and can help the actual spread of WSSMV, an aspect of this virus not yet well understood, to be explored.

Indexed as

Molecular Diagnostic TechniquesMosaic VirusesNucleic Acid Amplification TechniquesPotyviridaePlant ExtractsTriticumPlant Extracts

Identifiers

PMID38422072
PMCPMC10903832

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.