Evidence map›Paper›PMID 38418509›Full record

ArticleNature communications2024

Structure-function analysis of the cyclic β-1,2-glucan synthase from Agrobacterium tumefaciens.

Jaroslaw Sedzicki, Dongchun Ni, Frank Lehmann, Henning Stahlberg, Christoph Dehio

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Enzymes that catalyze cyclization of β-1,2-glucans.Applied microbiology and biotechnology · 2025
    Review
  8. Article
  9. Article
  10. Proteomics Exploration ofBioinformatics and biology insights · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jaroslaw Sedzicki *Biozentrum, University of Basel, Basel, CH-4056, Switzerland.ORCID 0000-0002-0194-2249
Dongchun Ni *Laboratory of Biological Electron Microscopy (LBEM), IPHYS, SB, EPFL, and Department of Fundamental Microbiology, Faculty of Biology and Medicine, University of Lausanne, Lausanne, CH-1015, Switzerland.ORCID 0000-0002-3193-6077
Frank LehmannBiozentrum, University of Basel, Basel, CH-4056, Switzerland.
Henning StahlbergLaboratory of Biological Electron Microscopy (LBEM), IPHYS, SB, EPFL, and Department of Fundamental Microbiology, Faculty of Biology and Medicine, University of Lausanne, Lausanne, CH-1015, Switzerland. henning.stahlberg@epfl.ch.ORCID 0000-0002-1185-4592
Christoph DehioBiozentrum, University of Basel, Basel, CH-4056, Switzerland. christoph.dehio@unibas.ch.ORCID 0000-0001-7288-1052
University of Basel · CHÉcole Polytechnique Fédérale de Lausanne · CH

Funding

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 180541Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 310030B_201273Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) CRSII5_177195Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) SSSTC
6 · The paper itself

Abstract

The synthesis of complex sugars is a key aspect of microbial biology. Cyclic β-1,2-glucan (CβG) is a circular polysaccharide critical for host interactions of many bacteria, including major pathogens of humans (Brucella) and plants (Agrobacterium). CβG is produced by the cyclic glucan synthase (Cgs), a multi-domain membrane protein. So far, its structure as well as the mechanism underlining the synthesis have not been clarified. Here we use cryo-electron microscopy (cryo-EM) and functional approaches to study Cgs from A. tumefaciens. We determine the structure of this complex protein machinery and clarify key aspects of CβG synthesis, revealing a distinct mechanism that uses a tyrosine-linked oligosaccharide intermediate in cycles of polymerization and processing of the glucan chain. Our research opens possibilities for combating pathogens that rely on polysaccharide virulence factors and may lead to synthetic biology approaches for producing complex cyclic sugars.

Indexed as

Agrobacterium tumefaciensbeta-GlucansGlucosyltransferasesBrucella abortusCryoelectron MicroscopyGlucansHumansSugarsbeta-1,2-glucanbeta-GlucansGlucansglucan synthaseGlucosyltransferasesSugars

Identifiers

PMID38418509
PMCPMC10901819
OpenAlexW4392230098

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.