Evidence map›Paper›PMID 38417794›Full record

ArticleThe Journal of biological chemistry2024

ORMDL3 regulates NLRP3 inflammasome activation by maintaining ER-mitochondria contacts in human macrophages and dictates ulcerative colitis patient outcome.

Jyotsna Sharma, Shaziya Khan, Nishakumari C Singh, Shikha Sahu, Desh Raj, Shakti Prakash, Pamela Bandyopadhyay, Kabita Sarkar, Vivek Bhosale, Tulika Chandra and 9 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Deletion of the T1D risk geneBiochemistry and biophysics reports · 2026
    Article
  3. Review
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  7. ORMDL Proteins Turnover via Proteasome and Autophagy Is Cell-Type Dependent and Tied to Ceramide Homeostasis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  8. Article
  9. Review
  10. Review
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  13. Frontiers in genetics · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Jyotsna SharmaPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Shaziya KhanPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Nishakumari C SinghSophisticated Analytical Instrument Facility and Research Division, CSIR-Central Drug Research Institute, Lucknow, India.
Shikha SahuDepartment of Gastroenterology, Sanjay Gandhi postgraduate institute of medical sciences, Lucknow, India.
Desh RajPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Shakti PrakashPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Pamela BandyopadhyayPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India.
Kabita SarkarPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India.
Vivek BhosaleToxicology and Experimental Medicine Division, CSIR-Central Drug Research Institute, Lucknow, India.
Tulika ChandraDepartment of Transfusion Medicine, Kings George Medical University, Lucknow, India.
Jagavelu KumaraveluPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Manoj Kumar BarthwalPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Shashi Kumar GuptaPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Mrigank SrivastavaAcademy of Scientific and Innovative Research (AcSIR), Ghaziabad, India; Molecular Parasitology and Immunology Division, CSIR-Central Drug Research Institute, Lucknow, India.
Rajdeep GuhaLab Animal Facility, CSIR-Central Drug Research Institute, Lucknow, India.
Veena AmmanathanPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India.
Uday C GhoshalDepartment of Gastroenterology, Sanjay Gandhi postgraduate institute of medical sciences, Lucknow, India.
Kalyan MitraAcademy of Scientific and Innovative Research (AcSIR), Ghaziabad, India; Sophisticated Analytical Instrument Facility and Research Division, CSIR-Central Drug Research Institute, Lucknow, India.
Amit LahiriPharmacology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India. Electronic address: amit.lahiri@cdri.res.in.
Academy of Scientific and Innovative Research · INCentral Drug Research Institute · INSanjay Gandhi Post Graduate Institute of Medical Sciences · INKing George's Medical University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide association studies in inflammatory bowel disease have identified risk loci in the orosomucoid-like protein 3/ORMDL sphingolipid biosynthesis regulator 3 (ORMDL3) gene to confer susceptibility to ulcerative colitis (UC), but the underlying functional relevance remains unexplored. Here, we found that a subpopulation of the UC patients who had higher disease activity shows enhanced expression of ORMDL3 compared to the patients with lower disease activity and the non-UC controls. We also found that the patients showing high ORMDL3 mRNA expression have elevated interleukin-1β cytokine levels indicating positive correlation. Further, knockdown of ORMDL3 in the human monocyte-derived macrophages resulted in significantly reduced interleukin-1β release. Mechanistically, we report for the first time that ORMDL3 contributes to a mounting inflammatory response via modulating mitochondrial morphology and activation of the NLRP3 inflammasome. Specifically, we observed an increased fragmentation of mitochondria and enhanced contacts with the endoplasmic reticulum (ER) during ORMDL3 over-expression, enabling efficient NLRP3 inflammasome activation. We show that ORMDL3 that was previously known to be localized in the ER also becomes localized to mitochondria-associated membranes and mitochondria during inflammatory conditions. Additionally, ORMDL3 interacts with mitochondrial dynamic regulating protein Fis-1 present in the mitochondria-associated membrane. Accordingly, knockdown of ORMDL3 in a dextran sodium sulfate -induced colitis mouse model showed reduced colitis severity. Taken together, we have uncovered a functional role for ORMDL3 in mounting inflammation during UC pathogenesis by modulating ER-mitochondrial contact and dynamics.

Indexed as

Colitis, UlcerativeEndoplasmic ReticulumInflammasomesMacrophagesMembrane ProteinsMitochondriaNLR Family, Pyrin Domain-Containing 3 ProteinAnimalsDextran SulfateHumansInterleukin-1betaMaleMiceDextran SulfateInflammasomesInterleukin-1betaMembrane ProteinsNLR Family, Pyrin Domain-Containing 3 ProteinNLRP3 protein, humanORMDL3 protein, humanORMDL3 protein, mousecytokineinlfammasomeinterleukin-1βmitochondriamitochondrial-associated ER membraneORMDL3ulcerative colitis

Identifiers

PMID38417794
PMCPMC11065740
OpenAlexW4392202377

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.