Evidence map›Paper›PMID 38416578›Full record

ArticleNucleic acids research2024

A circular RNA-gawky-chromatin regulatory axis modulates stress-induced transcription.

Rui Su, Min Zhou, Jiamei Lin, Ge Shan, Chuan Huang

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  8. circHERC1-A telomerase activator.Science advances · 2025
    Article
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  14. Nanoparticles-Delivered Circular RNA Strategy as a Novel Antitumor Approach.International journal of molecular sciences · 2024
    Review
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  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Rui SuSchool of Life Sciences, Chongqing University, Chongqing 401331, China.
Min ZhouDepartment of Obstetrics and Gynecology, Women and Children's Hospital of Chongqing Medical University, Chongqing 401147, China.
Jiamei LinSchool of Life Sciences, Chongqing University, Chongqing 401331, China.
Ge ShanSchool of Basic Medical Sciences, Division of Life Science and Medicine, University of Science and Technology of China, Hefei 230027, China.ORCID 0000-0002-3561-2088
Chuan HuangSchool of Life Sciences, Chongqing University, Chongqing 401331, China.ORCID 0000-0003-2565-9154
Chongqing University · CNChildren's Hospital of Chongqing Medical University · CNUniversity of Science and Technology of China · CN

Funding

Chongqing Talents Plan for Young Talents cstc2022ycjh-bgzxm0140Fundamental Research Funds for the Central Universities of China 2023CDJXY-009Innovation Support Program for Overseas Returned Scholars of Chongqing, China cx2019142National Natural Science Foundation of China 32270601
6 · The paper itself

Abstract

In response to heavy metal stress, the RNA-binding protein (RBP) gawky translocates into the nucleus and acts as a chromatin-interacting factor to activate the transcription of many stress-responsive genes. However, the upstream regulators of gawky-mediated transcription and their mechanistic details remain unknown. Here, we identified a class of metal-responsive element-containing circRNAs (MRE circRNAs) which specifically interact with gawky during copper stress. Using classic stress-responsive genes as a readout (Drosophila MT), we found that overexpression of MRE circRNAs led to a significant repression in stress-induced transcription. Mechanistically, MRE circRNAs promote the dissociation of gawky from chromatin and increase its aberrant cytoplasmic accumulation, which ultimately impedes the loading of RNA polymerase II to the active gene loci. The MRE motif serves as an important RNA regulon for maintaining the circRNA-gawky interaction, loss of which impaired the inhibitory effects of MRE circRNAs on gawky. Through RNA-seq analyses, we then identified over 500 additional stress-responsive genes whose induced transcription was attenuated upon MRE circRNA overexpression. Finally, we uncovered the physiological relevance of MRE circRNA-mediated regulation in cellular defense against copper overloading. Taken together, this study proposes that the circRNA-RBP-chromatin axis may represent a fundamental regulatory network for gene expression in eukaryotic cells.

Indexed as

ChromatinRNA, CircularTranscription, GeneticAnimalsCopperDrosophila melanogasterDrosophila ProteinsGene Expression RegulationRNA-Binding ProteinsRNA Polymerase IIStress, PhysiologicalChromatinCopperDrosophila ProteinsGw protein, DrosophilaRNA-Binding ProteinsRNA, CircularRNA Polymerase II

Identifiers

PMID38416578
PMCPMC11039993
OpenAlexW4392242257

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.