Evidence map›Paper›PMID 38413794›Full record

ArticleOncogene2024

Spontaneous expression of the CIC::DUX4 fusion oncoprotein from a conditional allele potently drives sarcoma formation in genetically engineered mice.

Peter G Hendrickson, Kristianne M Oristian, MaKenna R Browne, Lixia Luo, Yan Ma, Diana M Cardona, Joshua O Nash, Pedro L Ballester, Scott Davidson, Adam Shlien and 2 more

Open access · greenAbstract read
In one paragraph

Article in Oncogene, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. ThebioRxiv : the preprint server for biology · 2024
    Article
  8. Review
  9. Epigenetic determinants of fusion-driven sarcomas: paradigms and challenges.Frontiers in cell and developmental biology · 2024
    Article
  10. Molecular and therapeutic advancements in Capicua (Frontiers in cell and developmental biology · 2024
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Peter G Hendrickson *Department of Radiation Oncology, Duke University Medical Center, Durham, NC, USA.
Kristianne M Oristian *Department of Radiation Oncology, Duke University Medical Center, Durham, NC, USA.
MaKenna R BrowneDepartment of Radiation Oncology, Duke University Medical Center, Durham, NC, USA.
Lixia LuoDepartment of Radiation Oncology, Duke University Medical Center, Durham, NC, USA.
Yan MaDepartment of Radiation Oncology, Duke University Medical Center, Durham, NC, USA.
Diana M CardonaDepartment of Pathology, Duke University Medical Center, Durham, NC, USA.
Joshua O NashProgram in Genetics and Genome Biology, The Hospital for Sick Children (SickKids), University of Toronto, Toronto, ON, Canada.
Pedro L BallesterLaboratory of Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada.
Scott DavidsonLaboratory of Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada.
Adam ShlienProgram in Genetics and Genome Biology, The Hospital for Sick Children (SickKids), University of Toronto, Toronto, ON, Canada.ORCID 0000-0002-0368-5370
Corinne M LinardicDepartment of Pediatrics, Duke University Medical Center, Durham, NC, USA.
David G KirschDepartment of Radiation Oncology, Duke University Medical Center, Durham, NC, USA. David.kirsch@uhn.ca.ORCID 0000-0002-2086-205X
Duke Medical Center · USUniversity of Toronto · CADuke University · US

Funding

Advancing Cancer Therapy through Ground Breaking Research in Radiation BiologyR35CA197616 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI David Guy Kirsch · 2016 to 2026
$10.7M
Duke Radiation Oncology and Radiology Stimulating Access to Research in ResidencyR38CA245204 · NCI · DUKE UNIVERSITY · PI FLOYD, SCOTT R · 2020 to 2023
$1.4M
NCI NIH HHS R35 CA197616NCI NIH HHS R38 CA245204
6 · The paper itself

Abstract

cic:DUX4 sarcoma (CDS) is a rare but highly aggressive undifferentiated small round cell sarcoma driven by a fusion between the tumor suppressor Capicua (CIC) and DUX4. Currently, there are no effective treatments and efforts to identify and translate better therapies are limited by the scarcity of patient tumor samples and cell lines. To address this limitation, we generated three genetically engineered mouse models of CDS (Ch7CDS, Ai9CDS, and TOPCDS). Remarkably, chimeric mice from all three conditional models developed spontaneous soft tissue tumors and disseminated disease in the absence of Cre-recombinase. The penetrance of spontaneous (Cre-independent) tumor formation was complete irrespective of bi-allelic Cic function and the distance between adjacent loxP sites. Characterization of soft tissue and presumed metastatic tumors showed that they consistently expressed the CIC::DUX4 fusion protein and many downstream markers of the disease credentialing the models as CDS. In addition, tumor-derived cell lines were generated and ChIP-seq was preformed to map fusion-gene specific binding using an N-terminal HA epitope tag. These datasets, along with paired H3K27ac ChIP-sequencing maps, validate CIC::DUX4 as a neomorphic transcriptional activator. Moreover, they are consistent with a model where ETS family transcription factors are cooperative and redundant drivers of the core regulatory circuitry in CDS.

Indexed as

SarcomaSarcoma, Small CellSoft Tissue NeoplasmsAllelesAnimalsBiomarkers, TumorHumansMiceOncogene Proteins, FusionProto-Oncogene Proteins c-etsBiomarkers, TumorOncogene Proteins, FusionProto-Oncogene Proteins c-ets

Identifiers

PMID38413794
PMCPMC11027086
OpenAlexW4392197506

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.