Evidence map›Paper›PMID 38412523›Full record

ArticlePhysical biology2024

Dynamical model of antibiotic responses linking expression of resistance genes to metabolism explains emergence of heterogeneity during drug exposures.

Mirjana Stevanovic, João Pedro Teuber Carvalho, Philip Bittihn, Daniel Schultz

Open access · hybridAbstract read
In one paragraph

Article in Physical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Mirjana StevanovicDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, United States of America.ORCID 0000-0002-3229-2787
João Pedro Teuber CarvalhoDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, United States of America.ORCID 0009-0005-2557-4339
Philip BittihnMax Planck Institute for Dynamics and Self-Organization, Göttingen, Germany.ORCID 0000-0002-1276-9381
Daniel SchultzDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, United States of America.ORCID 0000-0002-3080-3416
Dartmouth College · USMax Planck Institute for Dynamics and Self-Organization · DE

Funding

Zhao - Proj 2P20GM130454 · NIGMS · DARTMOUTH COLLEGE · PI Li Song · 2019 to 2026
$27.2M
NIGMS NIH HHS P20 GM130454
6 · The paper itself

Abstract

Antibiotic responses in bacteria are highly dynamic and heterogeneous, with sudden exposure of bacterial colonies to high drug doses resulting in the coexistence of recovered and arrested cells. The dynamics of the response is determined by regulatory circuits controlling the expression of resistance genes, which are in turn modulated by the drug's action on cell growth and metabolism. Despite advances in understanding gene regulation at the molecular level, we still lack a framework to describe how feedback mechanisms resulting from the interdependence between expression of resistance and cell metabolism can amplify naturally occurring noise and create heterogeneity at the population level. To understand how this interplay affects cell survival upon exposure, we constructed a mathematical model of the dynamics of antibiotic responses that links metabolism and regulation of gene expression, based on the tetracycline resistance

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialBacteriaModels, TheoreticalTetracyclineAnti-Bacterial AgentsTetracyclineantibiotic resistancecell responsesdynamicsgene regulationstochasticity

Identifiers

PMID38412523
PMCPMC10988634
OpenAlexW4392185815

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.