Evidence map›Paper›PMID 38412122›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

The ALOG domain defines a family of plant-specific transcription factors acting during Arabidopsis flower development.

Philippe Rieu, Veronica Maria Beretta, Francesca Caselli, Emmanuel Thévénon, Jérémy Lucas, Mahmoud Rizk, Emanuela Franchini, Elisabetta Caporali, Chiara Paleni, Max H Nanao and 5 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

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  10. Characterization and Expression Analysis of thePlants (Basel, Switzerland) · 2025
    Article
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  12. Genome-wide identification and characterization ofFrontiers in plant science · 2025
    Article
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  15. The ALOG domain defines a family of plant-specific transcription factors acting during Arabidopsis flower development.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Philippe Rieu *Laboratoire Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre national de la recherche scientifique, Commissariat à l'énergie atomique et aux énergies alternatives, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, Département de Biologie Structurale et Cellulaire intégrée, Grenoble F-38054, France.ORCID 0009-0000-6149-1200
Veronica Maria Beretta *Dipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.ORCID 0000-0003-3293-5137
Francesca CaselliDipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.ORCID 0000-0002-9375-6979
Emmanuel ThévénonLaboratoire Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre national de la recherche scientifique, Commissariat à l'énergie atomique et aux énergies alternatives, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, Département de Biologie Structurale et Cellulaire intégrée, Grenoble F-38054, France.
Jérémy LucasLaboratoire Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre national de la recherche scientifique, Commissariat à l'énergie atomique et aux énergies alternatives, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, Département de Biologie Structurale et Cellulaire intégrée, Grenoble F-38054, France.ORCID 0000-0002-2252-4732
Mahmoud RizkStructural Biology Group, European Synchrotron Radiation Facility, Grenoble 38000, France.ORCID 0000-0002-3977-6186
Emanuela FranchiniDipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.
Elisabetta CaporaliDipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.
Chiara PaleniDipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.ORCID 0009-0007-7295-6844
Max H NanaoStructural Biology Group, European Synchrotron Radiation Facility, Grenoble 38000, France.
Martin M KaterDipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.ORCID 0000-0003-1155-2575
Renaud DumasLaboratoire Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre national de la recherche scientifique, Commissariat à l'énergie atomique et aux énergies alternatives, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, Département de Biologie Structurale et Cellulaire intégrée, Grenoble F-38054, France.ORCID 0000-0003-1404-3274
Chloe ZubietaLaboratoire Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre national de la recherche scientifique, Commissariat à l'énergie atomique et aux énergies alternatives, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, Département de Biologie Structurale et Cellulaire intégrée, Grenoble F-38054, France.
François ParcyLaboratoire Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre national de la recherche scientifique, Commissariat à l'énergie atomique et aux énergies alternatives, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, Département de Biologie Structurale et Cellulaire intégrée, Grenoble F-38054, France.ORCID 0000-0003-2191-500X
Veronica GregisDipartimento di Bioscienze, Università degli Studi di Milano, Milano 20133, Italy.ORCID 0000-0003-1876-9849
University of Milan · ITCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FREuropean Synchrotron Radiation Facility · FR

Funding

Agence Nationale de la Recherche (ANR) ANR-17-CE20-0014-01Agence Nationale de la Recherche (ANR) ANR-17-EURE-0003Agence Nationale de la Recherche (ANR) ANR-18-CE12-0014Agence Nationale de la Recherche (ANR) ANR-21-CE20-0024Ministero dell'Università e della Ricerca (MUR) PRIN2020/2020RX4NWM
6 · The paper itself

Abstract

The ALOG (Arabidopsis LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 (LSH1) and Oryza G1) proteins are conserved plant-specific Transcription Factors (TFs). They play critical roles in the development of various plant organs (meristems, inflorescences, floral organs, and nodules) from bryophytes to higher flowering plants. Despite the fact that the first members of this family were originally discovered in Arabidopsis, their role in this model plant has remained poorly characterized. Moreover, how these transcriptional regulators work at the molecular level is unknown. Here, we study the redundant function of the ALOG proteins LSH1,3,4 from Arabidopsis. We uncover their role in the repression of bract development and position them within a gene regulatory network controlling this process and involving the floral regulators LEAFY, BLADE-ON-PETIOLE, and PUCHI. Next, using in vitro genome-wide studies, we identified the conserved DNA motif bound by ALOG proteins from evolutionarily distant species (the liverwort

Indexed as

ArabidopsisArabidopsis ProteinsEmbryophytaDNAFlowersGene Expression Regulation, PlantInflorescenceNuclear ProteinsPlant ProteinsPlantsTranscription FactorsArabidopsis ProteinsDNALSH1 protein, ArabidopsisNuclear ProteinsPlant ProteinsTranscription FactorsALOG domainflower developmentplant transcription factors

Identifiers

PMID38412122
PMCPMC10927535
OpenAlexW4392201639

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.