Evidence map›Paper›PMID 38410950›Full record

ArticleJournal of enzyme inhibition and medicinal chemistry2024

Boronic acid inhibitors of penicillin-binding protein 1b: serine and lysine labelling agents.

Levente Kollár, Katarina Grabrijan, Martina Hrast Rambaher, Krištof Bozovičar, Tímea Imre, György G Ferenczy, Stanislav Gobec, György M Keserű

Open access · goldAbstract read
In one paragraph

Article in Journal of enzyme inhibition and medicinal chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Fused 3D boron heterocyclesChemical science · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Levente KollárMedicinal Chemistry Research Group, Research Centre for Natural Sciences, Budapest, Hungary.
Katarina GrabrijanFaculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia.
Martina Hrast RambaherFaculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia.
Krištof BozovičarFaculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia.
Tímea ImreMS Metabolomics Research Group, Research Centre for Natural Sciences, Budapest, Hungary.
György G FerenczyMedicinal Chemistry Research Group, Research Centre for Natural Sciences, Budapest, Hungary.
Stanislav GobecFaculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia.
György M KeserűMedicinal Chemistry Research Group, Research Centre for Natural Sciences, Budapest, Hungary.
University of Ljubljana · SIHUN-REN Research Centre for Natural Sciences · HUBudapest University of Technology and Economics · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Penicillin-binding proteins (PBPs) contribute to bacterial cell wall biosynthesis and are targets of antibacterial agents. Here, we investigated PBP1b inhibition by boronic acid derivatives. Chemical starting points were identified by structure-based virtual screening and aliphatic boronic acids were selected for further investigations. Structure-activity relationship studies focusing on the branching of the boron-connecting carbon and quantum mechanical/molecular mechanical simulations showed that reaction barrier free energies are compatible with fast reversible covalent binding and small or missing reaction free energies limit the inhibitory activity of the investigated boronic acid derivatives. Therefore, covalent labelling of the lysine residue of the catalytic dyad was also investigated. Compounds with a carbonyl warhead and an appropriately positioned boronic acid moiety were shown to inhibit and covalently label PBP1b. Reversible covalent labelling of the catalytic lysine by imine formation and the stabilisation of the imine by dative N-B bond is a new strategy for PBP1b inhibition.

Indexed as

LysineSerineAnti-Bacterial AgentsBoronic AcidsIminesPenicillin-Binding ProteinsAnti-Bacterial AgentsBoronic AcidsIminesLysinePenicillin-Binding ProteinsSerineboronic acidscovalent inhibitorslysine labellingPenicillin-binding proteinsserine labelling

Identifiers

PMID38410950
PMCPMC10901194
OpenAlexW4392193586

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.